| Back to Multiple platform build/check report for BioC 3.17: simplified long |
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This page was generated on 2023-03-27 11:04:57 -0400 (Mon, 27 Mar 2023).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) | x86_64 | R Under development (unstable) (2023-03-16 r83996) -- "Unsuffered Consequences" | 4547 |
| palomino3 | Windows Server 2022 Datacenter | x64 | R Under development (unstable) (2023-03-15 r83984 ucrt) -- "Unsuffered Consequences" | 4308 |
| merida1 | macOS 10.14.6 Mojave | x86_64 | R Under development (unstable) (2023-03-16 r83985) -- "Unsuffered Consequences" | 4300 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
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To the developers/maintainers of the chromstaR package: - Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/chromstaR.git to reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information. - Make sure to use the following settings in order to reproduce any error or warning you see on this page. |
| Package 335/2195 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| chromstaR 1.25.0 (landing page) Aaron Taudt
| nebbiolo1 | Linux (Ubuntu 22.04.1 LTS) / x86_64 | OK | ERROR | skipped | |||||||||
| palomino3 | Windows Server 2022 Datacenter / x64 | OK | ERROR | skipped | skipped | |||||||||
| merida1 | macOS 10.14.6 Mojave / x86_64 | OK | ERROR | skipped | skipped | |||||||||
| Package: chromstaR |
| Version: 1.25.0 |
| Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data chromstaR |
| StartedAt: 2023-03-26 16:12:50 -0400 (Sun, 26 Mar 2023) |
| EndedAt: 2023-03-26 16:17:16 -0400 (Sun, 26 Mar 2023) |
| EllapsedTime: 266.5 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
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### Running command:
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### /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data chromstaR
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* checking for file ‘chromstaR/DESCRIPTION’ ... OK
* preparing ‘chromstaR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘chromstaR.Rnw’ using knitr
Warning in (if (out_format(c("latex", "sweave", "listings"))) sanitize_fn else paste0)(path, :
dots in figure paths replaced with _ ("figure/univariate_braod_H4K20me1_2")
Quitting from lines 536-555 (chromstaR.Rnw)
Error: processing vignette 'chromstaR.Rnw' failed with diagnostics:
Timeout was reached: [www.ensembl.org:443] Operation timed out after 10001 milliseconds with 0 bytes received
--- failed re-building ‘chromstaR.Rnw’
SUMMARY: processing the following file failed:
‘chromstaR.Rnw’
Error: Vignette re-building failed.
Execution halted