Back to Multiple platform build/check report for BioC 3.17:   simplified   long
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This page was generated on 2023-06-09 11:05:10 -0400 (Fri, 09 Jun 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.2 LTS)x86_644.3.0 RC (2023-04-13 r84269) -- "Already Tomorrow" 4628
palomino3Windows Server 2022 Datacenterx644.3.0 RC (2023-04-13 r84269 ucrt) -- "Already Tomorrow" 4379
merida1macOS 12.6.4 Montereyx86_644.3.0 RC (2023-04-13 r84257) -- "Already Tomorrow" 4385
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for CNORdt on nebbiolo1


To the developers/maintainers of the CNORdt package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/CNORdt.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Package 378/2229HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
CNORdt 1.42.0  (landing page)
A. MacNamara
Snapshot Date: 2023-06-08 14:00:15 -0400 (Thu, 08 Jun 2023)
git_url: https://git.bioconductor.org/packages/CNORdt
git_branch: RELEASE_3_17
git_last_commit: 8b16c2d
git_last_commit_date: 2023-04-25 10:24:21 -0400 (Tue, 25 Apr 2023)
nebbiolo1Linux (Ubuntu 22.04.2 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.6.4 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: CNORdt
Version: 1.42.0
Command: /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL CNORdt
StartedAt: 2023-06-08 15:17:42 -0400 (Thu, 08 Jun 2023)
EndedAt: 2023-06-08 15:17:49 -0400 (Thu, 08 Jun 2023)
EllapsedTime: 7.1 seconds
RetCode: 0
Status:   OK  

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.17-bioc/R/bin/R CMD INSTALL CNORdt
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* installing to library ‘/home/biocbuild/bbs-3.17-bioc/R/site-library’
* installing *source* package ‘CNORdt’ ...
** using staged installation
** libs
using C compiler: ‘gcc (Ubuntu 11.3.0-1ubuntu1~22.04.1) 11.3.0’
gcc -I"/home/biocbuild/bbs-3.17-bioc/R/include" -DNDEBUG   -I/usr/local/include    -fpic  -g -O2  -Wall -c simulatorDT.c -o simulatorDT.o
simulatorDT.c: In function ‘simulatorDT’:
simulatorDT.c:55:13: warning: unused variable ‘nTimes’ [-Wunused-variable]
   55 |         int nTimes = INTEGER(nTimes_in)[0];
      |             ^~~~~~
simulatorDT.c:53:13: warning: unused variable ‘nSignals’ [-Wunused-variable]
   53 |         int nSignals = INTEGER(nSignals_in)[0];
      |             ^~~~~~~~
gcc -shared -L/home/biocbuild/bbs-3.17-bioc/R/lib -L/usr/local/lib -o CNORdt.so simulatorDT.o -L/home/biocbuild/bbs-3.17-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.17-bioc/R/site-library/00LOCK-CNORdt/00new/CNORdt/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (CNORdt)