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This page was generated on 2023-04-12 11:05:06 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for gpart on nebbiolo2


To the developers/maintainers of the gpart package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gpart.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 849/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gpart 1.16.0  (landing page)
Sun Ah Kim
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/gpart
git_branch: RELEASE_3_16
git_last_commit: 7af2524
git_last_commit_date: 2022-11-01 11:18:29 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: gpart
Version: 1.16.0
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gpart
StartedAt: 2023-04-10 16:54:55 -0400 (Mon, 10 Apr 2023)
EndedAt: 2023-04-10 16:55:04 -0400 (Mon, 10 Apr 2023)
EllapsedTime: 9.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
###
###   /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data gpart
###
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* checking for file ‘gpart/DESCRIPTION’ ... OK
* preparing ‘gpart’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘gpart’ ...
** using staged installation
** libs
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.16-bioc/R/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++14 -I"/home/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG  -I'/home/biocbuild/bbs-3.16-bioc/R/site-library/Rcpp/include' -I/usr/local/include   -fpic  -g -O2  -Wall -c gpart_cpp.cpp -o gpart_cpp.o
gpart_cpp.cpp: In function ‘uint32_t cubic_real_roots(double, double, double, Rcpp::NumericVector)’:
gpart_cpp.cpp:622:42: error: ‘PI’ was not declared in this scope
  622 |     solutions[1] = sq * cos(dxx + (2.0 * PI / 3.0)) - adiv3;
      |                                          ^~
make: *** [/home/biocbuild/bbs-3.16-bioc/R/etc/Makeconf:176: gpart_cpp.o] Error 1
ERROR: compilation failed for package ‘gpart’
* removing ‘/tmp/RtmpBbfkYZ/Rinst1183d456826b68/gpart’
      -----------------------------------
ERROR: package installation failed