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This page was generated on 2023-04-12 11:05:35 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for gpart on palomino4


To the developers/maintainers of the gpart package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/gpart.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 849/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
gpart 1.16.0  (landing page)
Sun Ah Kim
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/gpart
git_branch: RELEASE_3_16
git_last_commit: 7af2524
git_last_commit_date: 2022-11-01 11:18:29 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: gpart
Version: 1.16.0
Command: F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL gpart
StartedAt: 2023-04-10 16:26:57 -0400 (Mon, 10 Apr 2023)
EndedAt: 2023-04-10 16:27:07 -0400 (Mon, 10 Apr 2023)
EllapsedTime: 10.3 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD INSTALL gpart
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* installing to library 'F:/biocbuild/bbs-3.16-bioc/R/library'
* installing *source* package 'gpart' ...
** using staged installation
** libs
g++ -std=gnu++14  -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.16-bioc/R/library/Rcpp/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++14  -I"F:/biocbuild/bbs-3.16-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.16-bioc/R/library/Rcpp/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c gpart_cpp.cpp -o gpart_cpp.o
gpart_cpp.cpp: In function 'uint32_t cubic_real_roots(double, double, double, Rcpp::NumericVector)':
gpart_cpp.cpp:622:42: error: 'PI' was not declared in this scope
  622 |     solutions[1] = sq * cos(dxx + (2.0 * PI / 3.0)) - adiv3;
      |                                          ^~
make: *** [F:/biocbuild/bbs-3.16-bioc/R/etc/x64/Makeconf:260: gpart_cpp.o] Error 1
ERROR: compilation failed for package 'gpart'
* removing 'F:/biocbuild/bbs-3.16-bioc/R/library/gpart'