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This page was generated on 2023-04-12 11:05:21 -0400 (Wed, 12 Apr 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4502
palomino4Windows Server 2022 Datacenterx644.2.3 (2023-03-15 ucrt) -- "Shortstop Beagle" 4282
lconwaymacOS 12.5.1 Montereyx86_644.2.3 (2023-03-15) -- "Shortstop Beagle" 4310
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TCGAbiolinksGUI on nebbiolo2


To the developers/maintainers of the TCGAbiolinksGUI package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TCGAbiolinksGUI.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2028/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TCGAbiolinksGUI 1.24.0  (landing page)
Tiago C. Silva
Snapshot Date: 2023-04-10 14:00:05 -0400 (Mon, 10 Apr 2023)
git_url: https://git.bioconductor.org/packages/TCGAbiolinksGUI
git_branch: RELEASE_3_16
git_last_commit: f97a450
git_last_commit_date: 2022-11-01 11:15:12 -0400 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: TCGAbiolinksGUI
Version: 1.24.0
Command: /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAbiolinksGUI
StartedAt: 2023-04-10 18:25:12 -0400 (Mon, 10 Apr 2023)
EndedAt: 2023-04-10 18:25:13 -0400 (Mon, 10 Apr 2023)
EllapsedTime: 1.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.16-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data TCGAbiolinksGUI
###
##############################################################################
##############################################################################


* checking for file ‘TCGAbiolinksGUI/DESCRIPTION’ ... OK
* preparing ‘TCGAbiolinksGUI’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
      -----------------------------------
* installing *source* package ‘TCGAbiolinksGUI’ ...
** using staged installation
** R
Error in parse(outFile) : 
  /tmp/RtmpCpYl4P/Rbuild1cdee84e3f3b98/TCGAbiolinksGUI/R/zzz.R:28:1: unexpected '}'
27: }
28: }
    ^
ERROR: unable to collate and parse R files for package ‘TCGAbiolinksGUI’
* removing ‘/tmp/RtmpCpYl4P/Rinst1cdee8ab71dac/TCGAbiolinksGUI’
      -----------------------------------
ERROR: package installation failed