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This page was generated on 2022-08-15 13:20:25 -0400 (Mon, 15 Aug 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4365
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4118
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4183
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for maser on nebbiolo1


To the developers/maintainers of the maser package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/maser.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1076/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
maser 1.14.0  (landing page)
Diogo F.T. Veiga
Snapshot Date: 2022-08-14 13:55:13 -0400 (Sun, 14 Aug 2022)
git_url: https://git.bioconductor.org/packages/maser
git_branch: RELEASE_3_15
git_last_commit: c6e1d3b
git_last_commit_date: 2022-04-26 11:49:25 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: maser
Version: 1.14.0
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data maser
StartedAt: 2022-08-14 16:53:12 -0400 (Sun, 14 Aug 2022)
EndedAt: 2022-08-14 16:54:44 -0400 (Sun, 14 Aug 2022)
EllapsedTime: 92.0 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
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### Running command:
###
###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data maser
###
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* checking for file ‘maser/DESCRIPTION’ ... OK
* preparing ‘maser’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘Introduction.Rmd’ using rmarkdown
Loading required package: ggplot2
Loading required package: GenomicRanges
Loading required package: stats4
Loading required package: BiocGenerics

Attaching package: 'BiocGenerics'

The following objects are masked from 'package:stats':

    IQR, mad, sd, var, xtabs

The following objects are masked from 'package:base':

    Filter, Find, Map, Position, Reduce, anyDuplicated, append,
    as.data.frame, basename, cbind, colnames, dirname, do.call,
    duplicated, eval, evalq, get, grep, grepl, intersect, is.unsorted,
    lapply, mapply, match, mget, order, paste, pmax, pmax.int, pmin,
    pmin.int, rank, rbind, rownames, sapply, setdiff, sort, table,
    tapply, union, unique, unsplit, which.max, which.min

Loading required package: S4Vectors

Attaching package: 'S4Vectors'

The following objects are masked from 'package:base':

    I, expand.grid, unname

Loading required package: IRanges
Loading required package: GenomeInfoDb
Welcome to maser
Warning: Removed 177 rows containing missing values (geom_violin).
--- finished re-building ‘Introduction.Rmd’

--- re-building ‘Protein_mapping.Rmd’ using rmarkdown
Quitting from lines 119-122 (Protein_mapping.Rmd) 
Error: processing vignette 'Protein_mapping.Rmd' failed with diagnostics:
HTTP error 404.
--- failed re-building ‘Protein_mapping.Rmd’

SUMMARY: processing the following file failed:
  ‘Protein_mapping.Rmd’

Error: Vignette re-building failed.
Execution halted