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INSTALL report for pathprint on tokay1

This page was generated on 2021-02-22 12:39:45 -0500 (Mon, 22 Feb 2021).

To the developers/maintainers of the pathprint package:
Please make sure to use the following settings in order to reproduce any error or warning you see on this page.
Package 1306/1974HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
pathprint 1.20.0
Sokratis Kariotis
Snapshot Date: 2021-02-21 14:52:07 -0500 (Sun, 21 Feb 2021)
URL: https://git.bioconductor.org/packages/pathprint
Branch: RELEASE_3_12
Last Commit: c7e4ddd
Last Changed Date: 2020-10-27 11:22:19 -0500 (Tue, 27 Oct 2020)
malbec1Linux (Ubuntu 18.04.5 LTS) / x86_64  OK    OK    ERROR  
nebbiolo1Linux (Ubuntu 20.04.2 LTS) / x86_64  OK    OK    ERROR  
tokay1Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: pathprint
Version: 1.20.0
Command: C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/pathprint_1.20.0.tar.gz && rm -rf pathprint.buildbin-libdir && mkdir pathprint.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pathprint.buildbin-libdir pathprint_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL pathprint_1.20.0.zip && rm pathprint_1.20.0.tar.gz pathprint_1.20.0.zip
StartedAt: 2021-02-21 16:42:32 -0500 (Sun, 21 Feb 2021)
EndedAt: 2021-02-21 16:43:09 -0500 (Sun, 21 Feb 2021)
EllapsedTime: 37.2 seconds
RetCode: 0
Status:   OK   

Command output

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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O https://malbec1.bioconductor.org/BBS/3.12/bioc/src/contrib/pathprint_1.20.0.tar.gz && rm -rf pathprint.buildbin-libdir && mkdir pathprint.buildbin-libdir && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=pathprint.buildbin-libdir pathprint_1.20.0.tar.gz && C:\Users\biocbuild\bbs-3.12-bioc\R\bin\R.exe CMD INSTALL pathprint_1.20.0.zip && rm pathprint_1.20.0.tar.gz pathprint_1.20.0.zip
###
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100  928k  100  928k    0     0  19.1M      0 --:--:-- --:--:-- --:--:-- 21.0M

install for i386

* installing *source* package 'pathprint' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'pathprint'
    finding HTML links ... done
    consensusDistance                       html  
    consensusFingerprint                    html  
    customCDFAnn                            html  
    diffPathways                            html  
    exprs2fingerprint                       html  
    genesets                                html  
    pathprint-package                       html  
    pathprint.Ce.gs                         html  
    pathprint.Dm.gs                         html  
    pathprint.Dr.gs                         html  
    pathprint.Hs.gs                         html  
    pathprint.Mm.gs                         html  
    pathprint.Rn.gs                         html  
    platform.thresholds                     html  
    pluripotents.frame                      html  
    single.chip.enrichment                  html  
    thresholdFingerprint                    html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: Package 'pathprint' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package can be loaded from final location
Warning: Package 'pathprint' is deprecated and will be removed from Bioconductor
  version 3.13
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'pathprint' ...
** testing if installed package can be loaded
Warning: Package 'pathprint' is deprecated and will be removed from Bioconductor
  version 3.13
* MD5 sums
packaged installation of 'pathprint' as pathprint_1.20.0.zip
* DONE (pathprint)
* installing to library 'C:/Users/biocbuild/bbs-3.12-bioc/R/library'
package 'pathprint' successfully unpacked and MD5 sums checked