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sscore

This package is deprecated. It will probably be removed from Bioconductor. Please refer to the package end-of-life guidelines for more information.

This package is for version 3.18 of Bioconductor. This package has been removed from Bioconductor. For the last stable, up-to-date release version, see sscore.

S-Score Algorithm for Affymetrix Oligonucleotide Microarrays


Bioconductor version: Release (3.18)

This package contains an implementation of the S-Score algorithm as described by Zhang et al (2002).

Author: Richard Kennedy <rkennedy at ms.soph.uab.edu>, based on C++ code from Li Zhang <zhangli at odin.mdacc.tmc.edu> and Borland Delphi code from Robnet Kerns <rtkerns at vcu.edu>.

Maintainer: Richard Kennedy <rkennedy at ms.soph.uab.edu>

Citation (from within R, enter citation("sscore")):

Installation

To install this package, start R (version "4.3") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

BiocManager::install("sscore")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF

Details

biocViews DifferentialExpression, Software
Version 1.74.0
In Bioconductor since BioC 1.8 (R-2.3) (18 years)
License GPL (>= 2)
Depends R (>= 1.8.0), affy, affyio
Imports
System Requirements
URL http://home.att.net/~richard-kennedy/professional.html
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Suggests affydata
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package
Windows Binary sscore_1.74.0.zip
macOS Binary (x86_64) sscore_1.74.0.tgz
macOS Binary (arm64) sscore_1.74.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/sscore
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/sscore
Package Short Url https://bioconductor.org/packages/sscore/
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