affydata
Affymetrix Data for Demonstration Purpose
Bioconductor version: Release (3.19)
Example datasets of a slightly large size. They represent 'real world examples', unlike the artificial examples included in the package affy.
Author: Laurent Gautier <laurent at cbs.dtu.dk>
Maintainer: Robert D Shear <rshear at ds.dfci.harvard.edu>
Citation (from within R, enter
citation("affydata")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
BiocManager::install("affydata")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("affydata")
affydata primer | R Script | |
Reference Manual |
Details
biocViews | ExperimentData, MicroarrayData, Tissue, TissueMicroarrayData |
Version | 1.52.0 |
In Bioconductor since | BioC 1.6 (R-2.1) or earlier (> 19.5 years) |
License | GPL (>= 2) |
Depends | R (>= 2.4.0), affy(>= 1.23.4) |
Imports | methods |
System Requirements | |
URL | https://bioconductor.org/packages/affydata |
Bug Reports | https://github.com/rafalab/affydata/issues |
See More
Suggests | hgu95av2cdf, hgu133acdf |
Linking To | |
Enhances | |
Depends On Me | affyContam |
Imports Me | |
Suggests Me | affy, affycoretools, affyPLM, arrayMvout, bgx, Biostrings, gcrma, Harman, mimager, puma, pvac, TurboNorm, vsn, RobLoxBioC |
Links To Me | |
Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | affydata_1.52.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Source Repository | git clone https://git.bioconductor.org/packages/affydata |
Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/affydata |
Package Short Url | https://bioconductor.org/packages/affydata/ |
Package Downloads Report | Download Stats |