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This is the development version of homosapienDEE2CellScore; for the stable release version, see homosapienDEE2CellScore.

Example Data Package for CellScore

Bioconductor version: Development (3.20)

This is a data package for normalised homosapien data downloaded from DEE2. The package both downloads, normalises, and filters the data, and provides a way to access the data from a canonical store without needing local processing. This package was built as a way to generate and store canonical test data for CellScore.

Author: Justin Marsh [aut, cre]

Maintainer: Justin Marsh <j.marsh at>

Citation (from within R, enter citation("homosapienDEE2CellScore")):


To install this package, start R (version "4.4") and enter:

if (!require("BiocManager", quietly = TRUE))

# The following initializes usage of Bioc devel


For older versions of R, please refer to the appropriate Bioconductor release.


To view documentation for the version of this package installed in your system, start R and enter:

Use the Data in this Data Package HTML R Script
Reference Manual PDF


biocViews ExperimentData, ExperimentHub, ExpressionData, Genome, RNASeqData
Version 1.1.0
License GPL (>= 3)
Imports Rtsne (>= 0.15), utils (>= 3.5.0), ExperimentHub, BiocGenerics, DESeq2, S4Vectors, SummarizedExperiment, getDEE2, MatrixGenerics
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Suggests knitr, rmarkdown, devtools, Biobase(>= 2.39.1), BiocManager, AnnotationHubData, ExperimentHubData, AnnotationHub, CellScore(>= 1.21.4)
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package homosapienDEE2CellScore_1.1.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone
Source Repository (Developer Access) git clone
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