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KOdata

This is the development version of KOdata; for the stable release version, see KOdata.

LINCS Knock-Out Data Package


Bioconductor version: Development (3.19)

Contains consensus genomic signatures (CGS) for experimental cell-line specific gene knock-outs as well as baseline gene expression data for a subset of experimental cell-lines. Intended for use with package KEGGlincs.

Author: Shana White

Maintainer: Shana White <vandersm at mail.uc.edu>

Citation (from within R, enter citation("KOdata")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("KOdata")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

Reference Manual PDF
NEWS Text
LICENSE Text

Details

biocViews CancerData, ExperimentData, ExpressionData, Homo_sapiens_Data
Version 1.29.0
License MIT + file LICENSE
Depends R (>= 3.3.0)
Imports
System Requirements
URL
See More
Suggests
Linking To
Enhances
Depends On Me KEGGlincs
Imports Me
Suggests Me
Links To Me
Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package KOdata_1.29.0.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/KOdata
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/KOdata
Package Short Url https://bioconductor.org/packages/KOdata/
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