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ChimpHumanBrainData

This is the development version of ChimpHumanBrainData; for the stable release version, see ChimpHumanBrainData.

Chimp and human brain data package


Bioconductor version: Development (3.19)

This data package contains chimp and human brain data extracted from the ArrayExpress accession E-AFMX-2. Both human and chimp RNAs were run on human hgu95av2 Affymetrix arrays. It is a useful dataset for tutorials.

Author: Roman Jaksik, Naomi Altman, and Sean Davis

Maintainer: Sean Davis <seandavi at gmail.com>

Citation (from within R, enter citation("ChimpHumanBrainData")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("ChimpHumanBrainData")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("ChimpHumanBrainData")
DiffExpressVignette.pdf PDF R Script
Reference Manual PDF

Details

biocViews ExperimentData, GEO, Homo_sapiens_Data, MicroarrayData, Pan_troglodytes_Data, Tissue, TissueMicroarrayData
Version 1.41.1
License MIT
Depends affy, qvalue, limma, hexbin, statmod
Imports
System Requirements
URL
See More
Suggests hgu95av2cdf
Linking To
Enhances
Depends On Me
Imports Me
Suggests Me
Links To Me
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package ChimpHumanBrainData_1.41.1.tar.gz
Windows Binary
macOS Binary (x86_64)
macOS Binary (arm64)
Source Repository git clone https://git.bioconductor.org/packages/ChimpHumanBrainData
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/ChimpHumanBrainData
Package Short Url https://bioconductor.org/packages/ChimpHumanBrainData/
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