FDb.FANTOM4.promoters.hg19
This is the development version of FDb.FANTOM4.promoters.hg19; for the stable release version, see FDb.FANTOM4.promoters.hg19.
Annotation package for FANTOM4 promoters identified from THP-1 cells
Bioconductor version: Development (3.20)
FANTOM4 promoters, liftOver'ed from hg18 to hg19, CpGs quantified
Author: Tim Triche, Jr.
Maintainer: Tim Triche, Jr. <tim.triche at gmail.com>
Citation (from within R, enter
citation("FDb.FANTOM4.promoters.hg19")
):
Installation
To install this package, start R (version "4.4") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("FDb.FANTOM4.promoters.hg19")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
Reference Manual |
Details
biocViews | AnnotationData, Homo_sapiens |
Version | 1.0.0 |
License | Artistic-2.0 |
Depends | GenomicFeatures(>= 1.7.22), Biostrings |
Imports | GenomicFeatures, AnnotationDbi |
System Requirements | |
URL |
See More
Suggests | BSgenome.Hsapiens.UCSC.hg19, rtracklayer, matrixStats |
Linking To | |
Enhances | |
Depends On Me | |
Imports Me | |
Suggests Me | |
Links To Me |
Package Archives
Follow Installation instructions to use this package in your R session.
Source Package | FDb.FANTOM4.promoters.hg19_1.0.0.tar.gz |
Windows Binary | |
macOS Binary (x86_64) | |
macOS Binary (arm64) | |
Package Short Url | https://bioconductor.org/packages/FDb.FANTOM4.promoters.hg19/ |
Package Downloads Report | Download Stats |