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occugene

This is the development version of occugene; for the stable release version, see occugene.

Functions for Multinomial Occupancy Distribution


Bioconductor version: Development (3.19)

Statistical tools for building random mutagenesis libraries for prokaryotes. The package has functions for handling the occupancy distribution for a multinomial and for estimating the number of essential genes in random transposon mutagenesis libraries.

Author: Oliver Will <oliverrreader at gmail.com>

Maintainer: Oliver Will <oliverrreader at gmail.com>

Citation (from within R, enter citation("occugene")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("occugene")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("occugene")
occugene PDF R Script
Reference Manual PDF

Details

biocViews Annotation, Pathways, Software
Version 1.63.0
In Bioconductor since BioC 2.2 (R-2.7) (16 years)
License GPL (>= 2)
Depends R (>= 2.0.0)
Imports
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package occugene_1.63.0.tar.gz
Windows Binary occugene_1.63.0.zip
macOS Binary (x86_64) occugene_1.63.0.tgz
macOS Binary (arm64) occugene_1.63.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/occugene
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/occugene
Bioc Package Browser https://code.bioconductor.org/browse/occugene/
Package Short Url https://bioconductor.org/packages/occugene/
Package Downloads Report Download Stats