DOI: 10.18129/B9.bioc.marray    

This is the development version of marray; for the stable release version, see marray.

Exploratory analysis for two-color spotted microarray data

Bioconductor version: Development (3.17)

Class definitions for two-color spotted microarray data. Fuctions for data input, diagnostic plots, normalization and quality checking.

Author: Yee Hwa (Jean) Yang <jeany at> with contributions from Agnes Paquet and Sandrine Dudoit.

Maintainer: Yee Hwa (Jean) Yang <jean at>

Citation (from within R, enter citation("marray")):


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PDF R Script marray Normalization
PDF R Script marray Overview
PDF R Script marrayClasses Overview
PDF R Script marrayClasses Tutorial (short)
PDF R Script marrayInput Introduction
PDF R Script marrayPlots Overview
PDF   Reference Manual


biocViews Microarray, Preprocessing, Software, TwoChannel
Version 1.77.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 17.5 years)
License LGPL
Depends R (>= 2.10.0), limma, methods
Suggests tkWidgets
Depends On Me beta7, CGHbase, convert, dyebias, dyebiasexamples, maigesPack, MineICA, nnNorm, OLIN, RBM, stepNorm, TurboNorm
Imports Me arrayQuality, ChAMP, methylPipe, MSstats, MSstatsShiny, nnNorm, OLIN, OLINgui, piano, stepNorm, timecourse
Suggests Me AgiMicroRna, DEGraph, Mfuzz
Links To Me
Build Report  

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