geneClassifiers
This is the development version of geneClassifiers; for the stable release version, see geneClassifiers.
Application of gene classifiers
Bioconductor version: Development (3.21)
This packages aims for easy accessible application of classifiers which have been published in literature using an ExpressionSet as input.
Author: R Kuiper [cre, aut] (ORCID:
Maintainer: R Kuiper <r.kuiper.emc at gmail.com>
citation("geneClassifiers")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("geneClassifiers")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("geneClassifiers")| geneClassifiers and missing probesets | ||
| geneClassifiers introduction | R Script | |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | BiomedicalInformatics, Classification, GeneExpression, Microarray, Software, Survival |
| Version | 1.31.0 |
| In Bioconductor since | BioC 3.5 (R-3.4) (7.5 years) |
| License | GPL-2 |
| Depends | R (>= 3.6.0) |
| Imports | utils, methods, stats, Biobase, BiocGenerics |
| System Requirements | |
| URL | https://doi.org/doi:10.18129/B9.bioc.geneClassifiers |
| Bug Reports | https://github.com/rkuiper/geneClassifiers/issues |
See More
| Suggests | testthat |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | geneClassifiers_1.31.0.tar.gz |
| Windows Binary (x86_64) | geneClassifiers_1.31.0.zip |
| macOS Binary (x86_64) | geneClassifiers_1.31.0.tgz |
| macOS Binary (arm64) | geneClassifiers_1.31.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/geneClassifiers |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/geneClassifiers |
| Bioc Package Browser | https://code.bioconductor.org/browse/geneClassifiers/ |
| Package Short Url | https://bioconductor.org/packages/geneClassifiers/ |
| Package Downloads Report | Download Stats |