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genArise

This is the development version of genArise; for the stable release version, see genArise.

Microarray Analysis tool


Bioconductor version: Development (3.19)

genArise is an easy to use tool for dual color microarray data. Its GUI-Tk based environment let any non-experienced user performs a basic, but not simple, data analysis just following a wizard. In addition it provides some tools for the developer.

Author: Ana Patricia Gomez Mayen <pgomez at ifc.unam.mx>,\\ Gustavo Corral Guille <gcorral at ifc.unam.mx>, \\ Lina Riego Ruiz <lriego at ifc.unam.mx>,\\ Gerardo Coello Coutino <gcoello at ifc.unam.mx>

Maintainer: IFC Development Team <info-genarise at ifc.unam.mx>

Citation (from within R, enter citation("genArise")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("genArise")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("genArise")
genAriseGUI Vignette PDF R Script
Reference Manual PDF
LICENSE Text

Details

biocViews Microarray, Preprocessing, Software, TwoChannel
Version 1.79.0
In Bioconductor since BioC 1.6 (R-2.1) or earlier (> 19 years)
License file LICENSE
Depends R (>= 1.7.1), locfit, tkrplot, methods
Imports graphics, grDevices, methods, stats, tcltk, utils, xtable
System Requirements
URL http://www.ifc.unam.mx/genarise
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package genArise_1.79.0.tar.gz
Windows Binary genArise_1.79.0.zip
macOS Binary (x86_64) genArise_1.79.0.tgz
macOS Binary (arm64) genArise_1.79.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/genArise
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/genArise
Bioc Package Browser https://code.bioconductor.org/browse/genArise/
Package Short Url https://bioconductor.org/packages/genArise/
Package Downloads Report Download Stats