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MGFR

This is the development version of MGFR; for the stable release version, see MGFR.

Marker Gene Finder in RNA-seq data


Bioconductor version: Development (3.19)

The package is designed to detect marker genes from RNA-seq data.

Author: Khadija El Amrani

Maintainer: Khadija El Amrani <a.khadija at gmx.de>

Citation (from within R, enter citation("MGFR")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("MGFR")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("MGFR")
Using MGFR PDF R Script
Reference Manual PDF
NEWS Text

Details

biocViews GeneExpression, Genetics, ImmunoOncology, RNASeq, Software
Version 1.29.0
In Bioconductor since BioC 3.4 (R-3.3) (7.5 years)
License GPL-3
Depends R (>= 3.5)
Imports biomaRt, annotate
System Requirements
URL
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Suggests
Linking To
Enhances
Depends On Me sampleClassifier
Imports Me
Suggests Me
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Build Report Build Report

Package Archives

Follow Installation instructions to use this package in your R session.

Source Package MGFR_1.29.0.tar.gz
Windows Binary MGFR_1.29.0.zip
macOS Binary (x86_64) MGFR_1.29.0.tgz
macOS Binary (arm64) MGFR_1.29.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/MGFR
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/MGFR
Bioc Package Browser https://code.bioconductor.org/browse/MGFR/
Package Short Url https://bioconductor.org/packages/MGFR/
Package Downloads Report Download Stats