MEIGOR
This is the development version of MEIGOR; for the stable release version, see MEIGOR.
MEIGOR - MEtaheuristics for bIoinformatics Global Optimization
Bioconductor version: Development (3.21)
MEIGOR provides a comprehensive environment for performing global optimization tasks in bioinformatics and systems biology. It leverages advanced metaheuristic algorithms to efficiently search the solution space and is specifically tailored to handle the complexity and high-dimensionality of biological datasets. This package supports various optimization routines and is integrated with Bioconductor's infrastructure for a seamless analysis workflow.
Author: Jose A. Egea [aut, cre], David Henriques [aut], Alexandre Fdez. Villaverde [aut], Thomas Cokelaer [aut]
Maintainer: Jose A. Egea <josea.egea at gmail.com>
citation("MEIGOR")):
Installation
To install this package, start R (version "4.5") and enter:
if (!require("BiocManager", quietly = TRUE))
install.packages("BiocManager")
# The following initializes usage of Bioc devel
BiocManager::install(version='devel')
BiocManager::install("MEIGOR")
For older versions of R, please refer to the appropriate Bioconductor release.
Documentation
To view documentation for the version of this package installed in your system, start R and enter:
browseVignettes("MEIGOR")| MEIGOR: a software suite based on metaheuristics for global optimization in systems biology and bioinformatics | HTML | R Script |
| Reference Manual | ||
| NEWS | Text |
Details
| biocViews | Optimization, Software, SystemsBiology |
| Version | 1.41.0 |
| In Bioconductor since | BioC 3.0 (R-3.1) (10 years) |
| License | GPL-3 |
| Depends | R (>= 4.0), Rsolnp, snowfall, deSolve, CNORode |
| Imports | |
| System Requirements | |
| URL |
See More
| Suggests | CellNOptR, knitr, BiocStyle |
| Linking To | |
| Enhances | |
| Depends On Me | |
| Imports Me | |
| Suggests Me | |
| Links To Me | |
| Build Report | Build Report |
Package Archives
Follow Installation instructions to use this package in your R session.
| Source Package | MEIGOR_1.41.0.tar.gz |
| Windows Binary (x86_64) | MEIGOR_1.41.0.zip |
| macOS Binary (x86_64) | MEIGOR_1.41.0.tgz |
| macOS Binary (arm64) | MEIGOR_1.41.0.tgz |
| Source Repository | git clone https://git.bioconductor.org/packages/MEIGOR |
| Source Repository (Developer Access) | git clone git@git.bioconductor.org:packages/MEIGOR |
| Bioc Package Browser | https://code.bioconductor.org/browse/MEIGOR/ |
| Package Short Url | https://bioconductor.org/packages/MEIGOR/ |
| Package Downloads Report | Download Stats |