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HELP

This is the development version of HELP; for the stable release version, see HELP.

Tools for HELP data analysis


Bioconductor version: Development (3.19)

The package contains a modular pipeline for analysis of HELP microarray data, and includes graphical and mathematical tools with more general applications.

Author: Reid F. Thompson <reid.thompson at gmail.com>, John M. Greally <john.greally at einstein.yu.edu>, with contributions from Mark Reimers <mreimers at vcu.edu>

Maintainer: Reid F. Thompson <reid.thompson at gmail.com>

Citation (from within R, enter citation("HELP")):

Installation

To install this package, start R (version "4.4") and enter:


if (!require("BiocManager", quietly = TRUE))
    install.packages("BiocManager")

# The following initializes usage of Bioc devel
BiocManager::install(version='devel')

BiocManager::install("HELP")

For older versions of R, please refer to the appropriate Bioconductor release.

Documentation

To view documentation for the version of this package installed in your system, start R and enter:

browseVignettes("HELP")
1. Primer PDF R Script
Reference Manual PDF

Details

biocViews CpGIsland, DNAMethylation, DataImport, Microarray, Preprocessing, QualityControl, Software, TwoChannel, Visualization
Version 1.61.0
In Bioconductor since BioC 2.3 (R-2.8) (15.5 years)
License GPL (>= 2)
Depends R (>= 2.8.0), stats, graphics, grDevices, Biobase, methods
Imports
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Package Archives

Follow Installation instructions to use this package in your R session.

Source Package HELP_1.61.0.tar.gz
Windows Binary HELP_1.61.0.zip (64-bit only)
macOS Binary (x86_64) HELP_1.61.0.tgz
macOS Binary (arm64) HELP_1.61.0.tgz
Source Repository git clone https://git.bioconductor.org/packages/HELP
Source Repository (Developer Access) git clone git@git.bioconductor.org:packages/HELP
Bioc Package Browser https://code.bioconductor.org/browse/HELP/
Package Short Url https://bioconductor.org/packages/HELP/
Package Downloads Report Download Stats