Back to Mac ARM64 build report for BioC 3.19
ABCDEFGHIJKLM[N]OPQRSTUVWXYZ

This page was generated on 2024-05-07 11:32:40 -0400 (Tue, 07 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4461
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1418/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
netDx 1.16.0  (landing page)
Shraddha Pai
Snapshot Date: 2024-05-06 14:00:02 -0400 (Mon, 06 May 2024)
git_url: https://git.bioconductor.org/packages/netDx
git_branch: RELEASE_3_19
git_last_commit: 3e00d1b
git_last_commit_date: 2024-04-30 11:20:33 -0400 (Tue, 30 Apr 2024)
kjohnson3macOS 13.6.5 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for netDx on kjohnson3


To the developers/maintainers of the netDx package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: netDx
Version: 1.16.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data netDx
StartedAt: 2024-05-06 18:14:39 -0400 (Mon, 06 May 2024)
EndedAt: 2024-05-06 18:15:51 -0400 (Mon, 06 May 2024)
EllapsedTime: 71.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data netDx
###
##############################################################################
##############################################################################


* checking for file ‘netDx/DESCRIPTION’ ... OK
* preparing ‘netDx’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘ThreeWayClassifier.Rmd’ using rmarkdown

Quitting from lines  at lines 302-322 [unnamed-chunk-24] (ThreeWayClassifier.Rmd)
Error: processing vignette 'ThreeWayClassifier.Rmd' failed with diagnostics:
cannot open the connection
--- failed re-building 'ThreeWayClassifier.Rmd'

SUMMARY: processing the following file failed:
  'ThreeWayClassifier.Rmd'

Error: Vignette re-building failed.
Execution halted