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This page was generated on 2024-05-07 11:32:34 -0400 (Tue, 07 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4461
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 755/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowViz 1.68.0  (landing page)
Mike Jiang
Snapshot Date: 2024-05-06 14:00:02 -0400 (Mon, 06 May 2024)
git_url: https://git.bioconductor.org/packages/flowViz
git_branch: RELEASE_3_19
git_last_commit: 00b0a22
git_last_commit_date: 2024-04-30 10:16:06 -0400 (Tue, 30 Apr 2024)
kjohnson3macOS 13.6.5 Ventura / arm64  OK    OK    OK    OK  UNNEEDED, same version is already published

BUILD BIN results for flowViz on kjohnson3


To the developers/maintainers of the flowViz package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: flowViz
Version: 1.68.0
Command: rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh flowViz_1.68.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R flowViz.buildbin-libdir
StartedAt: 2024-05-07 02:34:51 -0400 (Tue, 07 May 2024)
EndedAt: 2024-05-07 02:34:56 -0400 (Tue, 07 May 2024)
EllapsedTime: 5.1 seconds
RetCode: 0
Status:   OK  
PackageFile: flowViz_1.68.0.tgz
PackageFileSize: 1.475 MiB

Command output

##############################################################################
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###
### Running command:
###
###   rm -rf flowViz.buildbin-libdir && mkdir flowViz.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh flowViz_1.68.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R flowViz.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=flowViz.buildbin-libdir flowViz_1.68.0.tar.gz'
>>>>>>> 

* installing *source* package ‘flowViz’ ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
in method for ‘densityplot’ with signature ‘x="formula",data="view"’: no definition for class “view”
in method for ‘densityplot’ with signature ‘x="formula",data="ncdfFlowSet"’: no definition for class “ncdfFlowSet”
in method for ‘densityplot’ with signature ‘x="formula",data="ncdfFlowList"’: no definition for class “ncdfFlowList”
in method for ‘histogram’ with signature ‘x="formula",data="ncdfFlowSet"’: no definition for class “ncdfFlowSet”
in method for ‘histogram’ with signature ‘x="formula",data="ncdfFlowList"’: no definition for class “ncdfFlowList”
in method for ‘glines’ with signature ‘x="norm2Filter",data="ANY"’: no definition for class “norm2Filter”
in method for ‘glines’ with signature ‘x="norm2Filter",data="logicalFilterResult"’: no definition for class “norm2Filter”
in method for ‘glines’ with signature ‘x="norm2Filter",data="flowFrame"’: no definition for class “norm2Filter”
in method for ‘glpoints’ with signature ‘x="norm2Filter",data="flowFrame",channels="character"’: no definition for class “norm2Filter”
in method for ‘glpolygon’ with signature ‘x="norm2Filter",data="ANY"’: no definition for class “norm2Filter”
in method for ‘glpolygon’ with signature ‘x="norm2Filter",data="logicalFilterResult"’: no definition for class “norm2Filter”
in method for ‘glpolygon’ with signature ‘x="norm2Filter",data="flowFrame"’: no definition for class “norm2Filter”
in method for ‘gpoints’ with signature ‘x="norm2Filter",data="flowFrame",channels="character"’: no definition for class “norm2Filter”
in method for ‘gpolygon’ with signature ‘x="norm2Filter",data="ANY"’: no definition for class “norm2Filter”
in method for ‘gpolygon’ with signature ‘x="norm2Filter",data="logicalFilterResult"’: no definition for class “norm2Filter”
in method for ‘gpolygon’ with signature ‘x="norm2Filter",data="flowFrame"’: no definition for class “norm2Filter”
in method for ‘xyplot’ with signature ‘x="formula",data="view"’: no definition for class “view”
in method for ‘xyplot’ with signature ‘x="view",data="missing"’: no definition for class “view”
in method for ‘xyplot’ with signature ‘x="formula",data="gateView"’: no definition for class “gateView”
in method for ‘xyplot’ with signature ‘x="formula",data="ncdfFlowSet"’: no definition for class “ncdfFlowSet”
in method for ‘xyplot’ with signature ‘x="formula",data="ncdfFlowList"’: no definition for class “ncdfFlowList”
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (flowViz)