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This page was generated on 2024-05-07 11:32:34 -0400 (Tue, 07 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4461
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 748/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
flowPloidy 1.30.0  (landing page)
Tyler Smith
Snapshot Date: 2024-05-06 14:00:02 -0400 (Mon, 06 May 2024)
git_url: https://git.bioconductor.org/packages/flowPloidy
git_branch: RELEASE_3_19
git_last_commit: 73cce91
git_last_commit_date: 2024-04-30 10:54:13 -0400 (Tue, 30 Apr 2024)
kjohnson3macOS 13.6.5 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for flowPloidy on kjohnson3


To the developers/maintainers of the flowPloidy package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: flowPloidy
Version: 1.30.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowPloidy
StartedAt: 2024-05-06 17:14:10 -0400 (Mon, 06 May 2024)
EndedAt: 2024-05-06 17:14:22 -0400 (Mon, 06 May 2024)
EllapsedTime: 12.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data flowPloidy
###
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* checking for file ‘flowPloidy/DESCRIPTION’ ... OK
* preparing ‘flowPloidy’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘flowPloidy-gettingStarted.Rmd’ using rmarkdown
! LaTeX Error: Lonely \item--perhaps a missing list environment.

Error: processing vignette 'flowPloidy-gettingStarted.Rmd' failed with diagnostics:
LaTeX failed to compile /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpCqmLWW/Rbuild10a25d6d92b/flowPloidy/vignettes/flowPloidy-gettingStarted.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See flowPloidy-gettingStarted.log for more info.
--- failed re-building ‘flowPloidy-gettingStarted.Rmd’

--- re-building ‘histogram-tour.Rmd’ using rmarkdown
! LaTeX Error: Lonely \item--perhaps a missing list environment.

Error: processing vignette 'histogram-tour.Rmd' failed with diagnostics:
LaTeX failed to compile /private/var/folders/r0/l4fjk6cj5xj0j3brt4bplpl40000gt/T/RtmpCqmLWW/Rbuild10a25d6d92b/flowPloidy/vignettes/histogram-tour.tex. See https://yihui.org/tinytex/r/#debugging for debugging tips. See histogram-tour.log for more info.
--- failed re-building ‘histogram-tour.Rmd’

SUMMARY: processing the following files failed:
  ‘flowPloidy-gettingStarted.Rmd’ ‘histogram-tour.Rmd’

Error: Vignette re-building failed.
Execution halted