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This page was generated on 2024-05-07 11:32:40 -0400 (Tue, 07 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
kjohnson3macOS 13.6.5 Venturaarm644.4.0 (2024-04-24) -- "Puppy Cup" 4461
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1472/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
OncoSimulR 4.6.0  (landing page)
Ramon Diaz-Uriarte
Snapshot Date: 2024-05-06 14:00:02 -0400 (Mon, 06 May 2024)
git_url: https://git.bioconductor.org/packages/OncoSimulR
git_branch: RELEASE_3_19
git_last_commit: 4fd9846
git_last_commit_date: 2024-04-30 10:37:33 -0400 (Tue, 30 Apr 2024)
kjohnson3macOS 13.6.5 Ventura / arm64  OK    ERROR  skippedskipped

BUILD results for OncoSimulR on kjohnson3


To the developers/maintainers of the OncoSimulR package:
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: OncoSimulR
Version: 4.6.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR
StartedAt: 2024-05-06 18:18:17 -0400 (Mon, 06 May 2024)
EndedAt: 2024-05-06 18:19:29 -0400 (Mon, 06 May 2024)
EllapsedTime: 71.8 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data OncoSimulR
###
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* checking for file ‘OncoSimulR/DESCRIPTION’ ... OK
* preparing ‘OncoSimulR’:
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘OncoSimulR.Rmd’ using rmarkdown
2024-05-06 18:18:52.965 R[57338:36423902] XType: Using static font registry.
Warning: ggrepel: 12 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 103 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 7 unlabeled data points (too many overlaps). Consider increasing max.overlaps
Warning: ggrepel: 20 unlabeled data points (too many overlaps). Consider increasing max.overlaps

Quitting from lines  at lines 12593-12616 [interventionsSimpleExampleNoInts] (OncoSimulR.Rmd)
Error: processing vignette 'OncoSimulR.Rmd' failed with diagnostics:
An unrecoverable exception happened in the simulation of the input object.Empty object with nothing to plot.
--- failed re-building ‘OncoSimulR.Rmd’

SUMMARY: processing the following file failed:
  ‘OncoSimulR.Rmd’

Error: Vignette re-building failed.
Execution halted