Back to Mac ARM64 build report for BioC 3.19 |
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This page was generated on 2024-05-07 11:32:36 -0400 (Tue, 07 May 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
kjohnson3 | macOS 13.6.5 Ventura | arm64 | 4.4.0 (2024-04-24) -- "Puppy Cup" | 4461 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 1028/2300 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
ImmuneSpace Package Maintainer
| kjohnson3 | macOS 13.6.5 Ventura / arm64 | OK | ERROR | skipped | skipped | ||||||||
To the developers/maintainers of the ImmuneSpaceR package: - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: ImmuneSpaceR |
Version: 1.32.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ImmuneSpaceR |
StartedAt: 2024-05-06 17:39:40 -0400 (Mon, 06 May 2024) |
EndedAt: 2024-05-06 17:39:48 -0400 (Mon, 06 May 2024) |
EllapsedTime: 8.1 seconds |
RetCode: 1 |
Status: ERROR |
PackageFile: None |
PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD build --keep-empty-dirs --no-resave-data ImmuneSpaceR ### ############################################################################## ############################################################################## * checking for file ‘ImmuneSpaceR/DESCRIPTION’ ... OK * preparing ‘ImmuneSpaceR’: * checking DESCRIPTION meta-information ... OK * installing the package to build vignettes * creating vignettes ... ERROR --- re-building ‘getDataset.Rmd’ using rmarkdown Quitting from lines at lines 37-40 [CreateConection] (getDataset.Rmd) Error: processing vignette 'getDataset.Rmd' failed with diagnostics: Invalid credential or deactivated account. Check your account in the portal. --- failed re-building ‘getDataset.Rmd’ --- re-building ‘getGEMatrix.Rmd’ using rmarkdown Quitting from lines at lines 38-41 [CreateConection] (getGEMatrix.Rmd) Error: processing vignette 'getGEMatrix.Rmd' failed with diagnostics: Invalid credential or deactivated account. Check your account in the portal. --- failed re-building ‘getGEMatrix.Rmd’ --- re-building ‘interactiveNetrc.Rmd’ using rmarkdown --- finished re-building ‘interactiveNetrc.Rmd’ --- re-building ‘Intro_to_ImmuneSpaceR.Rmd’ using rmarkdown Quitting from lines at lines 68-71 [CreateConnection] (Intro_to_ImmuneSpaceR.Rmd) Error: processing vignette 'Intro_to_ImmuneSpaceR.Rmd' failed with diagnostics: Invalid credential or deactivated account. Check your account in the portal. --- failed re-building ‘Intro_to_ImmuneSpaceR.Rmd’ --- re-building ‘report_SDY144.Rmd’ using rmarkdown Quitting from lines at lines 40-45 [unnamed-chunk-1] (report_SDY144.Rmd) Error: processing vignette 'report_SDY144.Rmd' failed with diagnostics: Invalid credential or deactivated account. Check your account in the portal. --- failed re-building ‘report_SDY144.Rmd’ --- re-building ‘report_SDY180.Rmd’ using rmarkdown Quitting from lines at lines 57-59 [connection] (report_SDY180.Rmd) Error: processing vignette 'report_SDY180.Rmd' failed with diagnostics: Invalid credential or deactivated account. Check your account in the portal. --- failed re-building ‘report_SDY180.Rmd’ --- re-building ‘report_SDY269.Rmd’ using rmarkdown Quitting from lines at lines 53-57 [connection] (report_SDY269.Rmd) Error: processing vignette 'report_SDY269.Rmd' failed with diagnostics: Invalid credential or deactivated account. Check your account in the portal. --- failed re-building ‘report_SDY269.Rmd’ SUMMARY: processing the following files failed: ‘getDataset.Rmd’ ‘getGEMatrix.Rmd’ ‘Intro_to_ImmuneSpaceR.Rmd’ ‘report_SDY144.Rmd’ ‘report_SDY180.Rmd’ ‘report_SDY269.Rmd’ Error: Vignette re-building failed. Execution halted