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This page was generated on 2024-05-18 11:37:31 -0400 (Sat, 18 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4485
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4515
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 2269/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
vsclust 1.6.0  (landing page)
Veit Schwaemmle
Snapshot Date: 2024-05-17 14:00:11 -0400 (Fri, 17 May 2024)
git_url: https://git.bioconductor.org/packages/vsclust
git_branch: RELEASE_3_19
git_last_commit: 567e9b8
git_last_commit_date: 2024-04-30 11:45:17 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD BIN results for vsclust on palomino3


To the developers/maintainers of the vsclust package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/vsclust.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: vsclust
Version: 1.6.0
Command: rm -rf vsclust.buildbin-libdir && mkdir vsclust.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=vsclust.buildbin-libdir vsclust_1.6.0.tar.gz
StartedAt: 2024-05-18 09:37:39 -0400 (Sat, 18 May 2024)
EndedAt: 2024-05-18 09:38:28 -0400 (Sat, 18 May 2024)
EllapsedTime: 48.6 seconds
RetCode: 0
Status:   OK  
PackageFile: vsclust_1.6.0.zip
PackageFileSize: 2.255 MiB

Command output

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### Running command:
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###   rm -rf vsclust.buildbin-libdir && mkdir vsclust.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=vsclust.buildbin-libdir vsclust_1.6.0.tar.gz
###
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* installing *source* package 'vsclust' ...
** using staged installation
** libs
using C++ compiler: 'G__~1.EXE (GCC) 13.2.0'
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c RcppExports.cpp -o RcppExports.o
g++ -std=gnu++17  -I"F:/biocbuild/bbs-3.19-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.19-bioc/R/library/Rcpp/include'   -I"C:/rtools44/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c vsclust_algo.cpp -o vsclust_algo.o
vsclust_algo.cpp: In function 'double c_plusplus_means(const Rcpp::NumericMatrix&, Rcpp::NumericMatrix&, Rcpp::NumericVector&, Rcpp::NumericVector&, int, int, double, int, Rcpp::NumericMatrix&, double, Rcpp::IntegerVector&, double, double)':
vsclust_algo.cpp:380:7: warning: this 'if' clause does not guard... [-Wmisleading-indentation]
  380 |       if(verbose)
      |       ^~
vsclust_algo.cpp:383:9: note: ...this statement, but the latter is misleadingly indented as if it were guarded by the 'if'
  383 |         ermin = new_fitness;
      |         ^~~~~
g++ -std=gnu++17 -shared -s -static-libgcc -o vsclust.dll tmp.def RcppExports.o vsclust_algo.o -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools44/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.19-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.19-bioc/meat/vsclust.buildbin-libdir/00LOCK-vsclust/00new/vsclust/libs/x64
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'vsclust' as vsclust_1.6.0.zip
* DONE (vsclust)