| Back to Multiple platform build/check report for BioC 3.18: simplified long |
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This page was generated on 2024-03-29 11:37:39 -0400 (Fri, 29 Mar 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4669 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" | 4404 |
| merida1 | macOS 12.7.1 Monterey | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4427 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 518/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| decoupleR 2.8.2 (landing page) Pau Badia-i-Mompel
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | ERROR | |||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | ERROR | ERROR | |||||||||
| merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | TIMEOUT | ERROR | |||||||||
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
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To the developers/maintainers of the decoupleR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/decoupleR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: decoupleR |
| Version: 2.8.2 |
| Command: rm -rf decoupleR.buildbin-libdir && mkdir decoupleR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh decoupleR_2.8.2.tar.gz /Library/Frameworks/R.framework/Resources/bin/R decoupleR.buildbin-libdir |
| StartedAt: 2024-03-28 11:21:53 -0400 (Thu, 28 Mar 2024) |
| EndedAt: 2024-03-28 11:22:03 -0400 (Thu, 28 Mar 2024) |
| EllapsedTime: 10.5 seconds |
| RetCode: 1 |
| Status: ERROR |
| PackageFile: None |
| PackageFileSize: NA |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf decoupleR.buildbin-libdir && mkdir decoupleR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh decoupleR_2.8.2.tar.gz /Library/Frameworks/R.framework/Resources/bin/R decoupleR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=decoupleR.buildbin-libdir decoupleR_2.8.2.tar.gz' >>>>>>> * installing *source* package ‘decoupleR’ ... ** using staged installation ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices *** copying figures ** building package indices ** installing vignettes Warning in file(con, "w") : cannot open file '/Users/biocbuild/bbs-3.18-bioc/meat/decoupleR.buildbin-libdir/00LOCK-decoupleR/00new/decoupleR/doc/index.html': No such file or directory Error in file(con, "w") : cannot open the connection ERROR: installing vignettes failed * removing ‘/Users/biocbuild/bbs-3.18-bioc/meat/decoupleR.buildbin-libdir/decoupleR’