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This page was generated on 2023-02-02 11:07:44 -0500 (Thu, 02 Feb 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4511
palomino4Windows Server 2022 Datacenterx644.2.2 (2022-10-31 ucrt) -- "Innocent and Trusting" 4289
lconwaymacOS 12.5.1 Montereyx86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4318
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for TADCompare on palomino4


To the developers/maintainers of the TADCompare package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/TADCompare.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2017/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
TADCompare 1.8.0  (landing page)
Kellen Cresswell
Snapshot Date: 2023-02-01 14:00:04 -0500 (Wed, 01 Feb 2023)
git_url: https://git.bioconductor.org/packages/TADCompare
git_branch: RELEASE_3_16
git_last_commit: ca77240
git_last_commit_date: 2022-11-01 11:22:10 -0500 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    ERROR  skipped
palomino4Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
lconwaymacOS 12.5.1 Monterey / x86_64  OK    ERROR  skippedskipped

Summary

Package: TADCompare
Version: 1.8.0
Command: chmod a+r TADCompare -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TADCompare
StartedAt: 2023-02-01 21:55:45 -0500 (Wed, 01 Feb 2023)
EndedAt: 2023-02-01 21:58:03 -0500 (Wed, 01 Feb 2023)
EllapsedTime: 137.7 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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###
### Running command:
###
###   chmod a+r TADCompare -R && F:\biocbuild\bbs-3.16-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data TADCompare
###
##############################################################################
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* checking for file 'TADCompare/DESCRIPTION' ... OK
* preparing 'TADCompare':
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building 'Input_Data.Rmd' using rmarkdown
--- finished re-building 'Input_Data.Rmd'

--- re-building 'Ontology_Analysis.Rmd' using rmarkdown
--- finished re-building 'Ontology_Analysis.Rmd'

--- re-building 'TADCompare.Rmd' using rmarkdown
Quitting from lines 96-103 (TADCompare.Rmd) 
Error: processing vignette 'TADCompare.Rmd' failed with diagnostics:
`x` must be a vector, not `NULL`.
--- failed re-building 'TADCompare.Rmd'

SUMMARY: processing the following file failed:
  'TADCompare.Rmd'

Error: Vignette re-building failed.
Execution halted