Back to Multiple platform build/check report for BioC 3.19:   simplified   long
ABCDEFGHIJKLMNOPQ[R]STUVWXYZ

This page was generated on 2024-05-17 11:37:20 -0400 (Fri, 17 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4485
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4515
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1748/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rfastp 1.14.0  (landing page)
Thomas Carroll
Snapshot Date: 2024-05-16 14:00:15 -0400 (Thu, 16 May 2024)
git_url: https://git.bioconductor.org/packages/Rfastp
git_branch: RELEASE_3_19
git_last_commit: 59fabd5
git_last_commit_date: 2024-04-30 11:26:27 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD results for Rfastp on palomino3


To the developers/maintainers of the Rfastp package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rfastp.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: Rfastp
Version: 1.14.0
Command: chmod a+r Rfastp -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rfastp
StartedAt: 2024-05-16 21:27:35 -0400 (Thu, 16 May 2024)
EndedAt: 2024-05-16 21:30:09 -0400 (Thu, 16 May 2024)
EllapsedTime: 154.3 seconds
RetCode: 0
Status:   OK  
PackageFile: Rfastp_1.14.0.tar.gz
PackageFileSize: 2.421 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   chmod a+r Rfastp -R && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rfastp
###
##############################################################################
##############################################################################


* checking for file 'Rfastp/DESCRIPTION' ... OK
* preparing 'Rfastp':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* running 'cleanup.win'
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* running 'cleanup.win'
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
Omitted 'LazyData' from DESCRIPTION
* building 'Rfastp_1.14.0.tar.gz'
Warning: file 'Rfastp/cleanup' did not have execute permissions: corrected