InterMine Team
| Snapshot Date: 2024-03-03 14:05:05 -0500 (Sun, 03 Mar 2024) |
| git_url: https://git.bioconductor.org/packages/InterMineR |
| git_branch: RELEASE_3_18 |
| git_last_commit: 44aa2fd |
| git_last_commit_date: 2023-10-24 10:59:29 -0500 (Tue, 24 Oct 2023) |
| Back to Multiple platform build/check report for BioC 3.18: simplified long |
|
This page was generated on 2024-03-04 11:37:28 -0500 (Mon, 04 Mar 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.2 Patched (2023-11-13 r85521) -- "Eye Holes" | 4692 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.2 (2023-10-31 ucrt) -- "Eye Holes" | 4445 |
| lconway | macOS 12.7.1 Monterey | x86_64 | 4.3.2 Patched (2023-11-01 r85457) -- "Eye Holes" | 4466 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 1037/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| InterMineR 1.24.0 (landing page) InterMine Team
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| lconway | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the InterMineR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/InterMineR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: InterMineR |
| Version: 1.24.0 |
| Command: rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.24.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R InterMineR.buildbin-libdir |
| StartedAt: 2024-03-04 00:46:41 -0500 (Mon, 04 Mar 2024) |
| EndedAt: 2024-03-04 00:47:22 -0500 (Mon, 04 Mar 2024) |
| EllapsedTime: 40.7 seconds |
| RetCode: 0 |
| Status: OK |
| PackageFile: InterMineR_1.24.0.tgz |
| PackageFileSize: 751.9 KiB |
############################################################################## ############################################################################## ### ### Running command: ### ### rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.24.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R InterMineR.buildbin-libdir ### ############################################################################## ############################################################################## >>>>>>> >>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=InterMineR.buildbin-libdir InterMineR_1.24.0.tar.gz' >>>>>>> * installing *source* package ‘InterMineR’ ... ** using staged installation ** R ** data *** moving datasets to lazyload DB ** inst ** byte-compile and prepare package for lazy loading Creating a new generic function for ‘intersect’ in package ‘InterMineR’ Creating a new generic function for ‘union’ in package ‘InterMineR’ Creating a new generic function for ‘subtract’ in package ‘InterMineR’ ** help Warning: ListManager-methods.Rd:41: unexpected section header '\arguments' Warning: ListManager-methods.Rd:42: unknown macro '\item' Warning: ListManager-methods.Rd:50: unexpected section header '\arguments' Warning: ListManager-methods.Rd:51: unknown macro '\item' Warning: ListManager-methods.Rd:59: unexpected section header '\arguments' Warning: ListManager-methods.Rd:60: unknown macro '\item' Warning: ListManager-methods.Rd:63: unknown macro '\item' Warning: ListManager-methods.Rd:66: unknown macro '\item' Warning: ListManager-methods.Rd:69: unknown macro '\item' Warning: ListManager-methods.Rd:72: unknown macro '\item' Warning: ListManager-methods.Rd:80: unexpected section header '\arguments' Warning: ListManager-methods.Rd:81: unknown macro '\item' Warning: ListManager-methods.Rd:84: unknown macro '\item' Warning: ListManager-methods.Rd:87: unknown macro '\item' Warning: ListManager-methods.Rd:90: unknown macro '\item' Warning: ListManager-methods.Rd:98: unexpected section header '\arguments' Warning: ListManager-methods.Rd:99: unknown macro '\item' Warning: ListManager-methods.Rd:102: unknown macro '\item' Warning: ListManager-methods.Rd:105: unknown macro '\item' Warning: ListManager-methods.Rd:108: unknown macro '\item' Warning: ListManager-methods.Rd:116: unexpected section header '\arguments' Warning: ListManager-methods.Rd:117: unknown macro '\item' Warning: ListManager-methods.Rd:120: unknown macro '\item' Warning: ListManager-methods.Rd:123: unknown macro '\item' Warning: ListManager-methods.Rd:126: unknown macro '\item' Warning: ListManager-methods.Rd:134: unexpected section header '\arguments' Warning: ListManager-methods.Rd:135: unknown macro '\item' Warning: ListManager-methods.Rd:138: unknown macro '\item' Warning: ListManager-methods.Rd:141: unknown macro '\item' Warning: ListManager-methods.Rd:144: unknown macro '\item' Warning: ListManager-methods.Rd:147: unknown macro '\item' *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Warning: multiple methods tables found for ‘union’ Warning: multiple methods tables found for ‘subtract’ Warning: multiple methods tables found for ‘intersect’ ** testing if installed package can be loaded from final location Warning: multiple methods tables found for ‘union’ Warning: multiple methods tables found for ‘subtract’ Warning: multiple methods tables found for ‘intersect’ ** testing if installed package keeps a record of temporary installation path * DONE (InterMineR)