Back to Multiple platform build/check report for BioC 3.18: simplified long |
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This page was generated on 2024-03-29 11:36:02 -0400 (Fri, 29 Mar 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4669 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" | 4404 |
merida1 | macOS 12.7.1 Monterey | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4427 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 974/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.8.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.8.0 |
Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings HPiP_1.8.0.tar.gz |
StartedAt: 2024-03-27 23:22:45 -0400 (Wed, 27 Mar 2024) |
EndedAt: 2024-03-27 23:36:25 -0400 (Wed, 27 Mar 2024) |
EllapsedTime: 819.6 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:HPiP.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings HPiP_1.8.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck’ * using R version 4.3.3 (2024-02-29) * using platform: x86_64-pc-linux-gnu (64-bit) * R was compiled by gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0 * running under: Ubuntu 22.04.4 LTS * using session charset: UTF-8 * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.8.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking loading without being on the library search path ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 35.542 1.044 36.587 FSmethod 34.589 0.605 35.195 corr_plot 34.046 0.391 34.440 pred_ensembel 13.486 0.638 10.724 enrichfindP 0.533 0.048 9.588 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... ‘HPiP_tutorial.Rmd’ using ‘UTF-8’... OK NONE * checking re-building of vignette outputs ... OK * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/home/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.3 (2024-02-29) -- "Angel Food Cake" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-pc-linux-gnu (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 97.510927 iter 10 value 88.003460 iter 20 value 87.940784 iter 30 value 87.913062 final value 87.912947 converged Fitting Repeat 2 # weights: 103 initial value 110.114570 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 102.342904 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.582803 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 98.462393 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 100.031837 final value 93.371808 converged Fitting Repeat 2 # weights: 305 initial value 95.080001 iter 10 value 87.881247 iter 20 value 87.564614 iter 30 value 87.564302 final value 87.564052 converged Fitting Repeat 3 # weights: 305 initial value 97.769491 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 121.314057 final value 94.032967 converged Fitting Repeat 5 # weights: 305 initial value 94.366970 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 97.168071 final value 94.032967 converged Fitting Repeat 2 # weights: 507 initial value 105.961876 iter 10 value 93.911283 iter 20 value 92.911667 final value 92.911638 converged Fitting Repeat 3 # weights: 507 initial value 124.787012 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 98.675625 iter 10 value 93.810206 final value 93.810010 converged Fitting Repeat 5 # weights: 507 initial value 95.374942 iter 10 value 93.622639 iter 20 value 93.090980 final value 93.090910 converged Fitting Repeat 1 # weights: 103 initial value 95.786655 iter 10 value 94.058804 iter 20 value 92.843107 iter 30 value 84.538775 iter 40 value 84.146089 iter 50 value 83.707544 iter 60 value 83.569545 iter 70 value 83.558723 final value 83.558719 converged Fitting Repeat 2 # weights: 103 initial value 103.036526 iter 10 value 94.056918 iter 20 value 92.479359 iter 30 value 84.505503 iter 40 value 83.908442 iter 50 value 83.400644 iter 60 value 83.376513 iter 70 value 83.338422 iter 80 value 83.328578 final value 83.328550 converged Fitting Repeat 3 # weights: 103 initial value 103.591107 iter 10 value 94.051969 iter 20 value 93.173441 iter 30 value 93.168694 iter 40 value 92.820084 iter 50 value 84.083941 iter 60 value 83.754299 iter 70 value 83.476659 iter 80 value 83.379096 iter 90 value 83.329265 final value 83.328550 converged Fitting Repeat 4 # weights: 103 initial value 101.949835 iter 10 value 94.050217 iter 20 value 89.801141 iter 30 value 82.608964 iter 40 value 82.387875 iter 50 value 81.484889 iter 60 value 81.304239 iter 70 value 81.074816 iter 80 value 81.043374 iter 80 value 81.043373 iter 80 value 81.043373 final value 81.043373 converged Fitting Repeat 5 # weights: 103 initial value 96.444265 iter 10 value 94.055759 iter 20 value 85.824286 iter 30 value 85.368802 iter 40 value 84.076136 iter 50 value 83.451214 iter 60 value 82.000298 iter 70 value 81.439069 iter 80 value 81.216687 iter 90 value 81.112509 iter 100 value 81.050278 final value 81.050278 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 100.984248 iter 10 value 93.456076 iter 20 value 93.124113 iter 30 value 90.959101 iter 40 value 86.275925 iter 50 value 83.360786 iter 60 value 82.579386 iter 70 value 82.168680 iter 80 value 81.831522 iter 90 value 81.663849 iter 100 value 81.440483 final value 81.440483 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 118.034494 iter 10 value 93.950015 iter 20 value 85.949371 iter 30 value 83.227807 iter 40 value 82.863967 iter 50 value 82.414872 iter 60 value 80.648838 iter 70 value 80.053219 iter 80 value 79.970879 iter 90 value 79.935807 iter 100 value 79.909011 final value 79.909011 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 99.391421 iter 10 value 88.101175 iter 20 value 85.095583 iter 30 value 83.853586 iter 40 value 83.634755 iter 50 value 83.568355 iter 60 value 83.558522 iter 70 value 83.286398 iter 80 value 82.201411 iter 90 value 80.520003 iter 100 value 80.168358 final value 80.168358 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 119.050712 iter 10 value 98.751063 iter 20 value 95.705127 iter 30 value 91.344798 iter 40 value 88.586742 iter 50 value 87.255362 iter 60 value 84.195036 iter 70 value 80.922634 iter 80 value 80.691783 iter 90 value 80.447140 iter 100 value 80.255581 final value 80.255581 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 105.871157 iter 10 value 93.512828 iter 20 value 86.263444 iter 30 value 85.155944 iter 40 value 83.047801 iter 50 value 82.599435 iter 60 value 82.229200 iter 70 value 81.988198 iter 80 value 81.795443 iter 90 value 81.594080 iter 100 value 81.457385 final value 81.457385 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.625453 iter 10 value 94.101767 iter 20 value 89.740733 iter 30 value 84.760848 iter 40 value 84.313495 iter 50 value 83.811347 iter 60 value 82.092607 iter 70 value 80.862614 iter 80 value 80.407201 iter 90 value 80.139551 iter 100 value 79.949152 final value 79.949152 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 127.626832 iter 10 value 96.781532 iter 20 value 95.480546 iter 30 value 93.683083 iter 40 value 84.084046 iter 50 value 83.363374 iter 60 value 82.352657 iter 70 value 81.132860 iter 80 value 80.264983 iter 90 value 79.805852 iter 100 value 79.697403 final value 79.697403 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.274071 iter 10 value 89.564972 iter 20 value 87.499125 iter 30 value 83.866867 iter 40 value 83.168433 iter 50 value 81.487945 iter 60 value 81.403827 iter 70 value 81.309800 iter 80 value 80.977115 iter 90 value 80.430694 iter 100 value 80.144913 final value 80.144913 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.395165 iter 10 value 94.066492 iter 20 value 94.051141 iter 30 value 93.177145 iter 40 value 90.421882 iter 50 value 84.474819 iter 60 value 82.248268 iter 70 value 81.373618 iter 80 value 80.535481 iter 90 value 79.889453 iter 100 value 79.818815 final value 79.818815 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 130.985412 iter 10 value 93.750629 iter 20 value 93.226322 iter 30 value 86.329322 iter 40 value 83.017475 iter 50 value 82.403510 iter 60 value 81.773226 iter 70 value 80.478952 iter 80 value 80.152464 iter 90 value 80.131960 iter 100 value 80.120660 final value 80.120660 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 106.972806 final value 94.054515 converged Fitting Repeat 2 # weights: 103 initial value 98.337522 final value 94.034392 converged Fitting Repeat 3 # weights: 103 initial value 105.775759 final value 94.054648 converged Fitting Repeat 4 # weights: 103 initial value 96.857361 final value 94.054732 converged Fitting Repeat 5 # weights: 103 initial value 98.794952 final value 94.054664 converged Fitting Repeat 1 # weights: 305 initial value 100.545195 iter 10 value 93.010945 iter 20 value 92.746560 iter 30 value 91.133855 iter 40 value 89.927685 iter 50 value 89.755329 iter 60 value 89.728575 iter 70 value 89.727995 iter 80 value 89.727825 iter 90 value 88.873401 iter 100 value 88.726028 final value 88.726028 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.930220 iter 10 value 83.850742 iter 20 value 82.686116 iter 30 value 82.466546 iter 40 value 82.205206 iter 50 value 82.204741 final value 82.203540 converged Fitting Repeat 3 # weights: 305 initial value 94.934112 iter 10 value 93.361460 iter 20 value 93.326422 iter 30 value 93.322593 iter 30 value 93.322592 iter 30 value 93.322592 final value 93.322592 converged Fitting Repeat 4 # weights: 305 initial value 98.196739 iter 10 value 83.278312 iter 20 value 81.166725 iter 30 value 80.866625 iter 40 value 80.793531 iter 50 value 80.793104 iter 60 value 80.792396 iter 70 value 80.789597 iter 80 value 80.118963 iter 90 value 79.990785 iter 100 value 79.530144 final value 79.530144 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 94.751733 iter 10 value 94.023751 iter 20 value 85.289016 iter 30 value 83.193091 iter 40 value 83.121287 iter 50 value 83.120901 iter 60 value 82.997444 iter 70 value 82.821510 iter 80 value 82.821032 iter 90 value 82.804858 iter 100 value 82.795186 final value 82.795186 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 118.364274 iter 10 value 94.060777 iter 20 value 94.027474 iter 30 value 83.699966 iter 40 value 83.693438 iter 50 value 83.687584 iter 60 value 83.653918 iter 70 value 83.647649 final value 83.644665 converged Fitting Repeat 2 # weights: 507 initial value 111.751851 iter 10 value 94.041081 iter 20 value 93.936312 iter 30 value 83.400115 iter 40 value 83.376837 iter 50 value 83.373916 iter 60 value 82.379559 iter 70 value 81.078896 iter 80 value 79.732852 iter 90 value 79.079019 iter 100 value 78.744044 final value 78.744044 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.535357 iter 10 value 93.330889 iter 20 value 93.047048 iter 30 value 83.674597 final value 83.674295 converged Fitting Repeat 4 # weights: 507 initial value 105.150850 iter 10 value 93.676468 iter 20 value 93.370403 iter 30 value 93.362687 final value 93.362577 converged Fitting Repeat 5 # weights: 507 initial value 94.297701 iter 10 value 93.384884 iter 20 value 93.362994 iter 30 value 93.273838 iter 40 value 93.091112 iter 50 value 82.035699 iter 60 value 81.039275 final value 81.031547 converged Fitting Repeat 1 # weights: 103 initial value 105.738170 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 94.928584 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 96.116647 final value 93.701656 converged Fitting Repeat 4 # weights: 103 initial value 100.033431 final value 94.466823 converged Fitting Repeat 5 # weights: 103 initial value 99.481636 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 98.733189 iter 10 value 94.467912 final value 94.466823 converged Fitting Repeat 2 # weights: 305 initial value 127.071567 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 122.542955 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 95.221469 iter 10 value 93.461560 iter 10 value 93.461560 iter 10 value 93.461560 final value 93.461560 converged Fitting Repeat 5 # weights: 305 initial value 114.269007 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 118.158533 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 111.420852 iter 10 value 94.485698 iter 20 value 94.468028 iter 30 value 94.443188 final value 94.443182 converged Fitting Repeat 3 # weights: 507 initial value 96.616912 final value 94.484211 converged Fitting Repeat 4 # weights: 507 initial value 100.153141 iter 10 value 93.692939 iter 10 value 93.692939 iter 10 value 93.692939 final value 93.692939 converged Fitting Repeat 5 # weights: 507 initial value 124.700856 final value 94.484210 converged Fitting Repeat 1 # weights: 103 initial value 107.572599 iter 10 value 94.313992 iter 20 value 92.621393 iter 30 value 92.287262 iter 40 value 89.169185 iter 50 value 83.018125 iter 60 value 81.778552 iter 70 value 81.703836 iter 80 value 81.553444 iter 90 value 81.369826 final value 81.291822 converged Fitting Repeat 2 # weights: 103 initial value 113.082619 iter 10 value 94.571166 iter 20 value 94.483841 iter 30 value 94.361531 iter 40 value 94.322460 iter 50 value 93.035993 iter 60 value 85.552187 iter 70 value 84.845138 iter 80 value 84.128213 iter 90 value 83.141592 iter 100 value 82.184531 final value 82.184531 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 105.819843 iter 10 value 94.420522 iter 20 value 93.984364 iter 30 value 92.191275 iter 40 value 92.139947 iter 50 value 92.125902 iter 60 value 86.577871 iter 70 value 83.565566 iter 80 value 83.192203 iter 90 value 83.081712 iter 100 value 82.992412 final value 82.992412 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.166762 iter 10 value 94.539425 iter 20 value 94.236001 iter 30 value 88.470114 iter 40 value 84.770709 iter 50 value 84.342988 iter 60 value 83.654767 iter 70 value 83.217694 final value 83.217370 converged Fitting Repeat 5 # weights: 103 initial value 98.182717 iter 10 value 94.488709 iter 20 value 94.488513 iter 30 value 85.172500 iter 40 value 84.674319 iter 50 value 84.461402 iter 60 value 84.405231 iter 70 value 83.477880 iter 80 value 83.081800 final value 83.081683 converged Fitting Repeat 1 # weights: 305 initial value 102.808694 iter 10 value 94.507096 iter 20 value 94.325075 iter 30 value 87.372065 iter 40 value 84.738881 iter 50 value 83.428921 iter 60 value 82.105231 iter 70 value 81.024123 iter 80 value 79.972160 iter 90 value 79.808436 iter 100 value 79.766754 final value 79.766754 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.091633 iter 10 value 94.400247 iter 20 value 84.734469 iter 30 value 84.021542 iter 40 value 83.613691 iter 50 value 83.450632 iter 60 value 83.360471 iter 70 value 83.271035 iter 80 value 82.729094 iter 90 value 82.181486 iter 100 value 80.777681 final value 80.777681 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 104.273425 iter 10 value 94.572100 iter 20 value 93.508813 iter 30 value 87.316061 iter 40 value 84.648087 iter 50 value 84.197737 iter 60 value 83.034812 iter 70 value 82.512985 iter 80 value 82.404102 iter 90 value 82.166968 iter 100 value 81.501698 final value 81.501698 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 119.578777 iter 10 value 93.711162 iter 20 value 87.022233 iter 30 value 84.448490 iter 40 value 83.078677 iter 50 value 82.839175 iter 60 value 82.738668 iter 70 value 82.691700 iter 80 value 81.779459 iter 90 value 80.478466 iter 100 value 80.140814 final value 80.140814 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.599407 iter 10 value 94.929306 iter 20 value 91.312134 iter 30 value 86.212706 iter 40 value 85.129745 iter 50 value 84.233949 iter 60 value 83.589789 iter 70 value 83.182877 iter 80 value 82.685963 iter 90 value 82.581048 iter 100 value 82.478275 final value 82.478275 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 103.733013 iter 10 value 94.077670 iter 20 value 84.939265 iter 30 value 84.343441 iter 40 value 82.374594 iter 50 value 81.288683 iter 60 value 81.057384 iter 70 value 80.640193 iter 80 value 80.301311 iter 90 value 80.087358 iter 100 value 80.015265 final value 80.015265 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.407178 iter 10 value 94.400281 iter 20 value 88.131822 iter 30 value 86.333019 iter 40 value 81.837349 iter 50 value 80.144982 iter 60 value 79.909224 iter 70 value 79.764678 iter 80 value 79.674299 iter 90 value 79.652694 iter 100 value 79.612034 final value 79.612034 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 102.895929 iter 10 value 92.399849 iter 20 value 83.309007 iter 30 value 82.598491 iter 40 value 82.497168 iter 50 value 82.202834 iter 60 value 81.819731 iter 70 value 81.043070 iter 80 value 80.900575 iter 90 value 80.557036 iter 100 value 80.416918 final value 80.416918 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 106.830600 iter 10 value 94.352335 iter 20 value 93.885192 iter 30 value 93.641667 iter 40 value 92.837472 iter 50 value 92.728614 iter 60 value 85.806124 iter 70 value 85.080313 iter 80 value 84.741735 iter 90 value 83.572098 iter 100 value 83.391018 final value 83.391018 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 112.964250 iter 10 value 94.437650 iter 20 value 88.465794 iter 30 value 87.014139 iter 40 value 85.638612 iter 50 value 83.181179 iter 60 value 82.518345 iter 70 value 82.370545 iter 80 value 81.807763 iter 90 value 81.556529 iter 100 value 81.438257 final value 81.438257 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.459382 final value 94.485880 converged Fitting Repeat 2 # weights: 103 initial value 98.654799 final value 94.468690 converged Fitting Repeat 3 # weights: 103 initial value 95.687037 final value 93.703311 converged Fitting Repeat 4 # weights: 103 initial value 101.907627 final value 94.485790 converged Fitting Repeat 5 # weights: 103 initial value 99.707894 final value 94.485801 converged Fitting Repeat 1 # weights: 305 initial value 114.691857 iter 10 value 94.488546 iter 20 value 94.451638 iter 30 value 92.732575 iter 40 value 90.024406 iter 50 value 84.445033 iter 60 value 83.902339 iter 70 value 83.896899 iter 80 value 83.837364 iter 90 value 83.823397 iter 100 value 83.823084 final value 83.823084 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.155941 iter 10 value 94.484883 iter 20 value 94.411089 iter 30 value 86.197061 iter 40 value 85.129448 iter 50 value 83.131817 iter 60 value 82.808167 iter 70 value 82.519176 iter 80 value 82.228858 iter 90 value 82.091269 iter 100 value 82.087066 final value 82.087066 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 97.779088 iter 10 value 94.488647 iter 20 value 93.964885 iter 30 value 83.571001 iter 40 value 81.996446 iter 50 value 81.885235 iter 60 value 81.876882 iter 70 value 81.870849 iter 80 value 81.870372 final value 81.870293 converged Fitting Repeat 4 # weights: 305 initial value 100.112809 iter 10 value 93.698189 iter 20 value 93.696800 iter 30 value 93.695638 iter 40 value 93.694388 iter 50 value 84.546080 iter 60 value 83.053231 iter 70 value 82.571841 iter 80 value 82.570087 final value 82.569467 converged Fitting Repeat 5 # weights: 305 initial value 107.359898 iter 10 value 94.488964 iter 20 value 94.269660 iter 30 value 94.265062 final value 94.263809 converged Fitting Repeat 1 # weights: 507 initial value 95.806927 iter 10 value 94.492339 iter 20 value 94.484239 iter 30 value 94.220262 iter 40 value 92.262698 iter 50 value 83.535995 iter 60 value 82.291789 iter 70 value 82.267408 iter 80 value 81.758156 iter 90 value 81.450389 iter 100 value 81.153765 final value 81.153765 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 106.212691 iter 10 value 93.970923 iter 20 value 86.694522 iter 30 value 86.660788 iter 40 value 86.594620 iter 50 value 86.569142 iter 60 value 84.727982 iter 70 value 84.692280 iter 80 value 84.622061 iter 90 value 84.615812 iter 100 value 84.607221 final value 84.607221 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 110.491979 iter 10 value 94.478662 iter 20 value 94.456973 iter 30 value 84.996762 iter 40 value 84.979392 iter 50 value 84.979150 iter 60 value 84.565894 iter 70 value 84.536873 iter 80 value 82.549162 iter 90 value 82.173786 iter 100 value 82.173324 final value 82.173324 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 96.473769 iter 10 value 94.475153 iter 20 value 94.469875 iter 30 value 92.969311 iter 40 value 85.108216 iter 50 value 82.636119 iter 60 value 82.006924 iter 70 value 81.987292 iter 80 value 81.986956 iter 90 value 81.607878 iter 100 value 79.928926 final value 79.928926 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 116.947824 iter 10 value 94.492072 iter 20 value 94.386167 iter 30 value 93.432625 iter 40 value 92.652827 iter 50 value 83.672081 iter 60 value 81.351091 iter 70 value 80.905611 iter 80 value 80.842914 iter 90 value 80.841385 iter 100 value 80.809869 final value 80.809869 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 94.715689 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 94.647164 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 94.932274 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 111.178180 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 98.984152 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 94.496504 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 101.922629 iter 10 value 94.112905 final value 94.112903 converged Fitting Repeat 3 # weights: 305 initial value 120.157951 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 135.314164 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 114.024928 final value 94.325945 converged Fitting Repeat 1 # weights: 507 initial value 98.790395 iter 10 value 94.112903 iter 10 value 94.112903 iter 10 value 94.112903 final value 94.112903 converged Fitting Repeat 2 # weights: 507 initial value 97.702270 iter 10 value 91.563151 iter 20 value 91.305212 iter 30 value 91.305167 iter 40 value 90.095116 iter 50 value 90.093015 iter 60 value 90.092733 iter 60 value 90.092733 iter 60 value 90.092732 final value 90.092732 converged Fitting Repeat 3 # weights: 507 initial value 95.880636 iter 10 value 94.112952 final value 94.112903 converged Fitting Repeat 4 # weights: 507 initial value 135.664157 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 99.486359 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 97.787871 iter 10 value 94.397521 iter 20 value 87.696329 iter 30 value 85.998946 iter 40 value 85.823232 iter 50 value 85.569632 iter 60 value 83.454356 iter 70 value 82.896987 iter 80 value 82.454124 iter 90 value 82.216231 iter 100 value 82.109713 final value 82.109713 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 102.631247 iter 10 value 94.481288 iter 20 value 94.321490 iter 30 value 94.316863 iter 40 value 89.451773 iter 50 value 86.784184 iter 60 value 85.846411 iter 70 value 85.232275 iter 80 value 84.396294 iter 90 value 84.356474 iter 100 value 84.355448 final value 84.355448 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 99.709017 iter 10 value 93.761383 iter 20 value 89.043780 iter 30 value 87.997023 iter 40 value 87.824095 iter 50 value 86.748104 iter 60 value 84.790246 iter 70 value 82.330231 iter 80 value 82.181893 final value 82.109699 converged Fitting Repeat 4 # weights: 103 initial value 96.579185 iter 10 value 94.480863 iter 20 value 91.723120 iter 30 value 85.206735 iter 40 value 84.898422 iter 50 value 84.230182 iter 60 value 83.281185 iter 70 value 82.960055 iter 80 value 82.442951 iter 90 value 82.116458 iter 100 value 82.109728 final value 82.109728 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 101.640735 iter 10 value 93.815384 iter 20 value 85.437986 iter 30 value 85.014846 iter 40 value 84.440837 iter 50 value 84.361620 final value 84.355442 converged Fitting Repeat 1 # weights: 305 initial value 113.876028 iter 10 value 94.747351 iter 20 value 89.651993 iter 30 value 86.975880 iter 40 value 85.177871 iter 50 value 84.966244 iter 60 value 84.706995 iter 70 value 84.542768 iter 80 value 84.331377 iter 90 value 82.730359 iter 100 value 82.474726 final value 82.474726 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.161664 iter 10 value 93.734803 iter 20 value 87.291795 iter 30 value 85.761797 iter 40 value 83.528912 iter 50 value 82.713318 iter 60 value 82.508627 iter 70 value 82.364466 iter 80 value 82.328593 iter 90 value 82.229899 iter 100 value 82.069174 final value 82.069174 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 110.265593 iter 10 value 95.746719 iter 20 value 94.873276 iter 30 value 85.944573 iter 40 value 84.931332 iter 50 value 83.503758 iter 60 value 82.891381 iter 70 value 82.690675 iter 80 value 82.419619 iter 90 value 82.029226 iter 100 value 81.959959 final value 81.959959 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 124.943544 iter 10 value 94.390108 iter 20 value 91.314965 iter 30 value 87.756547 iter 40 value 85.370741 iter 50 value 84.533654 iter 60 value 82.091068 iter 70 value 81.932602 iter 80 value 81.809045 iter 90 value 81.424087 iter 100 value 81.312495 final value 81.312495 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 100.420099 iter 10 value 93.532675 iter 20 value 89.340544 iter 30 value 84.848019 iter 40 value 83.732072 iter 50 value 83.093363 iter 60 value 82.322891 iter 70 value 81.897887 iter 80 value 81.739761 iter 90 value 81.470595 iter 100 value 81.404600 final value 81.404600 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.372157 iter 10 value 94.409889 iter 20 value 89.448935 iter 30 value 87.174513 iter 40 value 86.341347 iter 50 value 85.610462 iter 60 value 85.396665 iter 70 value 82.775744 iter 80 value 81.874469 iter 90 value 81.852999 iter 100 value 81.756008 final value 81.756008 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 104.149700 iter 10 value 94.457554 iter 20 value 90.471185 iter 30 value 85.768978 iter 40 value 84.308851 iter 50 value 82.974711 iter 60 value 82.346401 iter 70 value 82.198504 iter 80 value 81.548946 iter 90 value 81.010145 iter 100 value 80.834296 final value 80.834296 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.873602 iter 10 value 95.719052 iter 20 value 93.751997 iter 30 value 90.356383 iter 40 value 88.873548 iter 50 value 85.140237 iter 60 value 82.926224 iter 70 value 82.078324 iter 80 value 81.547232 iter 90 value 81.265661 iter 100 value 81.176520 final value 81.176520 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.218267 iter 10 value 94.723886 iter 20 value 92.141487 iter 30 value 85.700078 iter 40 value 83.751260 iter 50 value 83.357719 iter 60 value 82.666358 iter 70 value 81.613978 iter 80 value 81.126110 iter 90 value 80.998996 iter 100 value 80.873769 final value 80.873769 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 120.419026 iter 10 value 94.360166 iter 20 value 88.535893 iter 30 value 87.092643 iter 40 value 84.971774 iter 50 value 83.322289 iter 60 value 82.191473 iter 70 value 81.951216 iter 80 value 81.643568 iter 90 value 81.419532 iter 100 value 81.186448 final value 81.186448 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 104.731729 iter 10 value 94.486083 iter 20 value 94.484282 final value 94.484217 converged Fitting Repeat 2 # weights: 103 initial value 95.056382 iter 10 value 94.117120 final value 94.114973 converged Fitting Repeat 3 # weights: 103 initial value 97.599998 final value 94.485890 converged Fitting Repeat 4 # weights: 103 initial value 106.338714 final value 94.485887 converged Fitting Repeat 5 # weights: 103 initial value 110.186030 final value 94.485793 converged Fitting Repeat 1 # weights: 305 initial value 110.407687 iter 10 value 93.101602 iter 20 value 87.587448 iter 30 value 86.321852 iter 40 value 86.210154 iter 50 value 86.151659 final value 86.151115 converged Fitting Repeat 2 # weights: 305 initial value 122.615585 iter 10 value 88.752267 iter 20 value 87.211465 iter 30 value 87.209804 iter 40 value 87.021031 iter 50 value 86.337899 iter 60 value 85.603009 iter 70 value 84.234818 iter 80 value 81.263227 iter 90 value 80.670689 iter 100 value 80.472250 final value 80.472250 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 105.914516 iter 10 value 94.450452 iter 20 value 93.928482 iter 30 value 93.923772 iter 40 value 93.900676 final value 93.889833 converged Fitting Repeat 4 # weights: 305 initial value 94.809781 iter 10 value 94.487031 iter 20 value 93.722811 iter 30 value 93.706273 iter 40 value 87.595019 iter 50 value 87.590061 iter 60 value 87.072257 iter 70 value 87.055392 iter 80 value 86.471716 final value 86.305819 converged Fitting Repeat 5 # weights: 305 initial value 123.932140 iter 10 value 90.488618 iter 20 value 83.110222 iter 30 value 82.582293 iter 40 value 82.571022 iter 50 value 82.567398 iter 60 value 81.064092 iter 70 value 80.834085 iter 80 value 80.748192 final value 80.747452 converged Fitting Repeat 1 # weights: 507 initial value 104.581252 iter 10 value 94.120982 final value 94.115239 converged Fitting Repeat 2 # weights: 507 initial value 99.311846 iter 10 value 94.120700 iter 20 value 94.066520 iter 30 value 89.263968 iter 40 value 88.161410 iter 50 value 88.157750 iter 60 value 88.156623 iter 70 value 88.156305 iter 80 value 88.153251 iter 90 value 88.040326 iter 100 value 87.865533 final value 87.865533 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.460705 iter 10 value 93.966835 iter 20 value 93.962971 final value 93.962780 converged Fitting Repeat 4 # weights: 507 initial value 98.337395 iter 10 value 94.460216 iter 20 value 94.452813 iter 30 value 94.449463 iter 40 value 92.836935 iter 50 value 83.629841 iter 60 value 83.269052 iter 70 value 83.185599 iter 80 value 83.183788 final value 83.183601 converged Fitting Repeat 5 # weights: 507 initial value 95.010920 iter 10 value 94.304052 iter 20 value 94.283089 iter 30 value 93.928995 iter 40 value 93.905558 iter 50 value 93.873085 final value 93.873081 converged Fitting Repeat 1 # weights: 103 initial value 104.161168 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 99.951021 iter 10 value 93.763769 final value 93.763752 converged Fitting Repeat 3 # weights: 103 initial value 95.520120 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 98.080075 final value 93.943841 converged Fitting Repeat 5 # weights: 103 initial value 97.615738 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 105.145547 iter 10 value 93.764009 final value 93.763751 converged Fitting Repeat 2 # weights: 305 initial value 110.255894 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 108.102468 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 98.723007 iter 10 value 93.540117 iter 20 value 93.529157 iter 30 value 93.528625 final value 93.528624 converged Fitting Repeat 5 # weights: 305 initial value 101.814425 final value 93.763751 converged Fitting Repeat 1 # weights: 507 initial value 105.202470 final value 93.582418 converged Fitting Repeat 2 # weights: 507 initial value 95.117527 iter 10 value 93.582418 iter 10 value 93.582418 iter 10 value 93.582418 final value 93.582418 converged Fitting Repeat 3 # weights: 507 initial value 94.227733 final value 93.582418 converged Fitting Repeat 4 # weights: 507 initial value 127.639995 final value 94.050155 converged Fitting Repeat 5 # weights: 507 initial value 114.774447 final value 94.052910 converged Fitting Repeat 1 # weights: 103 initial value 103.851949 iter 10 value 89.379397 iter 20 value 85.328858 iter 30 value 85.114277 iter 40 value 84.411210 iter 50 value 84.281552 iter 60 value 84.272619 final value 84.272611 converged Fitting Repeat 2 # weights: 103 initial value 96.616708 iter 10 value 94.063205 iter 20 value 93.978815 iter 30 value 93.739082 iter 40 value 93.598048 iter 50 value 93.582740 iter 60 value 87.574744 iter 70 value 87.306577 iter 80 value 86.915699 iter 90 value 86.283847 iter 100 value 85.176283 final value 85.176283 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 96.236081 iter 10 value 94.056424 iter 20 value 93.664358 iter 30 value 93.042433 iter 40 value 85.794508 iter 50 value 84.831209 iter 60 value 84.491788 iter 70 value 84.369395 iter 80 value 84.337218 iter 90 value 84.329040 iter 100 value 84.272834 final value 84.272834 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 98.643767 iter 10 value 93.880672 iter 20 value 93.646645 iter 30 value 87.659662 iter 40 value 84.920983 iter 50 value 84.852478 iter 60 value 84.728809 iter 70 value 84.349458 iter 80 value 84.272701 final value 84.272611 converged Fitting Repeat 5 # weights: 103 initial value 100.666939 iter 10 value 94.044038 iter 20 value 86.108613 iter 30 value 83.533579 iter 40 value 83.288348 iter 50 value 82.895715 iter 60 value 82.079093 iter 70 value 81.310633 iter 80 value 80.515613 iter 90 value 80.410596 iter 100 value 80.123542 final value 80.123542 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 119.601819 iter 10 value 96.039000 iter 20 value 94.111728 iter 30 value 93.978318 iter 40 value 85.103246 iter 50 value 84.235467 iter 60 value 81.672837 iter 70 value 80.507032 iter 80 value 80.049882 iter 90 value 79.713549 iter 100 value 79.272329 final value 79.272329 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 105.895766 iter 10 value 91.548397 iter 20 value 89.398980 iter 30 value 84.456996 iter 40 value 83.045502 iter 50 value 82.028112 iter 60 value 80.115170 iter 70 value 78.830560 iter 80 value 78.407693 iter 90 value 78.331071 iter 100 value 78.224245 final value 78.224245 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 103.182185 iter 10 value 94.058504 iter 20 value 94.019039 iter 30 value 93.756955 iter 40 value 93.640538 iter 50 value 93.190652 iter 60 value 87.235011 iter 70 value 84.955705 iter 80 value 83.872681 iter 90 value 82.894386 iter 100 value 82.194218 final value 82.194218 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 103.611721 iter 10 value 94.063349 iter 20 value 93.832320 iter 30 value 93.341463 iter 40 value 86.040955 iter 50 value 85.713651 iter 60 value 84.930820 iter 70 value 83.984300 iter 80 value 82.824841 iter 90 value 82.441652 iter 100 value 81.235911 final value 81.235911 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 102.765772 iter 10 value 94.194496 iter 20 value 94.055691 iter 30 value 93.786289 iter 40 value 86.062257 iter 50 value 85.132966 iter 60 value 82.340605 iter 70 value 79.636059 iter 80 value 78.851657 iter 90 value 78.489405 iter 100 value 78.233962 final value 78.233962 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 104.887882 iter 10 value 94.293047 iter 20 value 93.918413 iter 30 value 85.661801 iter 40 value 84.349675 iter 50 value 82.694415 iter 60 value 81.475150 iter 70 value 80.983655 iter 80 value 80.613475 iter 90 value 79.968340 iter 100 value 79.086421 final value 79.086421 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 122.409649 iter 10 value 94.485157 iter 20 value 87.866257 iter 30 value 86.848069 iter 40 value 83.232087 iter 50 value 79.810753 iter 60 value 78.545595 iter 70 value 78.274483 iter 80 value 78.079059 iter 90 value 77.882191 iter 100 value 77.524700 final value 77.524700 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 108.511677 iter 10 value 95.099329 iter 20 value 94.069675 iter 30 value 93.996091 iter 40 value 92.709734 iter 50 value 86.511459 iter 60 value 82.914736 iter 70 value 80.831930 iter 80 value 80.039815 iter 90 value 79.472073 iter 100 value 78.800916 final value 78.800916 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 108.835478 iter 10 value 94.054318 iter 20 value 86.378641 iter 30 value 83.900771 iter 40 value 83.754861 iter 50 value 81.822968 iter 60 value 80.461265 iter 70 value 79.965109 iter 80 value 79.525003 iter 90 value 78.727732 iter 100 value 78.447773 final value 78.447773 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.890637 iter 10 value 95.518191 iter 20 value 93.527040 iter 30 value 85.975672 iter 40 value 83.149399 iter 50 value 81.992696 iter 60 value 80.434337 iter 70 value 78.403108 iter 80 value 77.916084 iter 90 value 77.642098 iter 100 value 77.378389 final value 77.378389 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 105.051628 final value 94.054543 converged Fitting Repeat 2 # weights: 103 initial value 98.579476 final value 94.054674 converged Fitting Repeat 3 # weights: 103 initial value 106.716690 final value 94.054629 converged Fitting Repeat 4 # weights: 103 initial value 98.836924 final value 94.054462 converged Fitting Repeat 5 # weights: 103 initial value 95.397869 final value 94.054657 converged Fitting Repeat 1 # weights: 305 initial value 95.173054 iter 10 value 92.670022 iter 20 value 91.719598 iter 30 value 91.718493 iter 40 value 91.718021 iter 50 value 91.714266 iter 60 value 91.229540 iter 70 value 91.026421 iter 80 value 91.000816 iter 90 value 89.730215 iter 100 value 88.582816 final value 88.582816 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 100.694497 iter 10 value 94.057722 iter 20 value 93.833852 iter 30 value 91.926486 iter 40 value 88.590030 iter 50 value 88.449624 iter 60 value 88.420683 iter 60 value 88.420683 final value 88.420683 converged Fitting Repeat 3 # weights: 305 initial value 105.515316 iter 10 value 93.587588 iter 20 value 93.585826 iter 30 value 93.585057 iter 40 value 93.542431 iter 50 value 93.494738 iter 60 value 93.470764 iter 70 value 91.983467 iter 80 value 80.745529 iter 90 value 80.487118 iter 100 value 80.485293 final value 80.485293 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 97.579856 iter 10 value 94.056881 iter 20 value 93.591151 iter 30 value 93.586281 iter 40 value 93.575472 iter 50 value 91.936474 iter 60 value 84.587415 iter 70 value 82.168853 iter 80 value 82.164941 iter 90 value 82.131422 iter 100 value 80.487709 final value 80.487709 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 98.134411 iter 10 value 94.057583 iter 20 value 92.731303 iter 30 value 87.552454 iter 40 value 87.547326 iter 50 value 86.897468 iter 60 value 83.815263 iter 70 value 83.266557 iter 80 value 82.645198 iter 90 value 82.516887 iter 100 value 80.529923 final value 80.529923 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 102.497529 iter 10 value 94.060849 iter 20 value 87.265332 iter 30 value 82.862713 iter 40 value 82.684922 iter 50 value 82.682125 iter 60 value 81.326581 iter 70 value 80.500162 iter 80 value 80.322855 iter 90 value 79.782999 iter 100 value 76.346479 final value 76.346479 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 96.999161 iter 10 value 94.059875 iter 20 value 94.038864 iter 30 value 94.032097 iter 40 value 94.026504 iter 50 value 94.024355 iter 60 value 93.595004 final value 93.539622 converged Fitting Repeat 3 # weights: 507 initial value 101.891359 iter 10 value 93.591462 iter 20 value 93.586632 iter 30 value 93.584807 iter 40 value 93.582851 iter 50 value 93.565377 iter 60 value 92.578235 iter 70 value 83.204955 iter 80 value 82.227100 iter 90 value 82.020701 iter 100 value 81.988911 final value 81.988911 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 114.204908 iter 10 value 88.228672 iter 20 value 82.733484 iter 30 value 82.649793 iter 40 value 82.629102 iter 50 value 82.441354 iter 60 value 82.300961 iter 70 value 81.006064 iter 80 value 80.677644 iter 90 value 80.670880 iter 90 value 80.670879 final value 80.670879 converged Fitting Repeat 5 # weights: 507 initial value 106.270023 iter 10 value 89.812945 iter 20 value 86.099893 iter 30 value 86.095424 iter 40 value 86.093872 iter 50 value 85.786783 iter 60 value 85.783171 iter 70 value 85.780964 iter 80 value 85.666849 iter 90 value 85.516986 iter 100 value 85.516907 final value 85.516907 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 95.973892 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 112.103179 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 99.311659 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 98.073791 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 101.571740 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 101.881465 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 106.071485 final value 94.466823 converged Fitting Repeat 3 # weights: 305 initial value 114.528241 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 97.719912 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 99.415424 final value 94.484207 converged Fitting Repeat 1 # weights: 507 initial value 107.553509 final value 94.466823 converged Fitting Repeat 2 # weights: 507 initial value 115.494680 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 103.978382 final value 94.466823 converged Fitting Repeat 4 # weights: 507 initial value 99.275027 iter 10 value 94.403760 iter 20 value 92.656325 iter 30 value 91.943298 iter 40 value 91.939942 iter 50 value 91.855939 final value 91.855935 converged Fitting Repeat 5 # weights: 507 initial value 112.834967 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 99.530531 iter 10 value 94.415475 iter 20 value 93.047403 iter 30 value 92.998279 iter 40 value 87.298091 iter 50 value 84.758239 iter 60 value 84.331869 iter 70 value 83.757936 iter 80 value 83.602140 iter 90 value 83.212100 iter 100 value 82.409647 final value 82.409647 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 96.742208 iter 10 value 93.845788 iter 20 value 93.642729 iter 30 value 93.277451 iter 40 value 86.695119 iter 50 value 85.211726 iter 60 value 84.721628 iter 70 value 82.720041 iter 80 value 81.761907 iter 90 value 81.575636 iter 100 value 81.381301 final value 81.381301 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 96.377001 iter 10 value 94.486526 iter 20 value 93.436873 iter 30 value 93.030678 iter 40 value 92.967213 iter 50 value 88.764341 iter 60 value 86.556112 iter 70 value 85.802155 iter 80 value 84.653628 iter 90 value 81.622817 iter 100 value 81.361495 final value 81.361495 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 97.389762 iter 10 value 94.237200 iter 20 value 87.312664 iter 30 value 86.702581 iter 40 value 86.067953 iter 50 value 85.871652 iter 60 value 83.859335 iter 70 value 83.606563 iter 80 value 83.197652 iter 90 value 83.026254 iter 100 value 83.014650 final value 83.014650 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 98.761740 iter 10 value 94.534621 iter 20 value 94.487430 iter 30 value 87.767383 iter 40 value 87.283174 iter 50 value 86.539297 iter 60 value 85.098990 iter 70 value 84.689290 iter 80 value 84.529872 iter 90 value 84.022864 iter 100 value 83.687523 final value 83.687523 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 99.639158 iter 10 value 94.506014 iter 20 value 90.671423 iter 30 value 87.190666 iter 40 value 85.730200 iter 50 value 82.694315 iter 60 value 82.268453 iter 70 value 82.037971 iter 80 value 81.013704 iter 90 value 80.445293 iter 100 value 80.080179 final value 80.080179 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 113.174362 iter 10 value 94.664445 iter 20 value 93.149288 iter 30 value 87.498833 iter 40 value 85.506363 iter 50 value 85.067006 iter 60 value 82.897158 iter 70 value 82.517106 iter 80 value 82.405137 iter 90 value 82.373308 iter 100 value 82.316117 final value 82.316117 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 108.749968 iter 10 value 94.052640 iter 20 value 88.971969 iter 30 value 84.976775 iter 40 value 83.754199 iter 50 value 82.366490 iter 60 value 81.042728 iter 70 value 80.618333 iter 80 value 80.490611 iter 90 value 80.435032 iter 100 value 80.341428 final value 80.341428 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 116.205099 iter 10 value 94.440017 iter 20 value 87.810927 iter 30 value 86.862203 iter 40 value 86.435043 iter 50 value 86.252584 iter 60 value 86.131444 iter 70 value 85.553495 iter 80 value 84.059013 iter 90 value 82.158005 iter 100 value 81.294603 final value 81.294603 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 127.469457 iter 10 value 94.521141 iter 20 value 94.051972 iter 30 value 87.658541 iter 40 value 85.630642 iter 50 value 84.029213 iter 60 value 82.993888 iter 70 value 81.955043 iter 80 value 81.238991 iter 90 value 80.213391 iter 100 value 79.812422 final value 79.812422 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 123.828450 iter 10 value 95.096185 iter 20 value 93.201878 iter 30 value 93.041523 iter 40 value 90.871156 iter 50 value 89.797910 iter 60 value 86.419146 iter 70 value 84.126261 iter 80 value 82.941417 iter 90 value 81.609484 iter 100 value 80.772496 final value 80.772496 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 113.526224 iter 10 value 93.807576 iter 20 value 88.653087 iter 30 value 87.561068 iter 40 value 85.649654 iter 50 value 84.544830 iter 60 value 81.701980 iter 70 value 80.856576 iter 80 value 80.185963 iter 90 value 80.021691 iter 100 value 79.842211 final value 79.842211 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.059604 iter 10 value 94.577839 iter 20 value 84.725754 iter 30 value 83.829547 iter 40 value 83.318407 iter 50 value 83.225849 iter 60 value 82.920421 iter 70 value 82.855143 iter 80 value 82.628885 iter 90 value 81.144438 iter 100 value 80.902099 final value 80.902099 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 120.147518 iter 10 value 96.009099 iter 20 value 94.483484 iter 30 value 87.966567 iter 40 value 84.644881 iter 50 value 84.327887 iter 60 value 83.904143 iter 70 value 82.392783 iter 80 value 82.124441 iter 90 value 81.675169 iter 100 value 80.796296 final value 80.796296 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 121.089826 iter 10 value 94.942314 iter 20 value 87.578117 iter 30 value 84.211215 iter 40 value 83.532310 iter 50 value 82.815397 iter 60 value 81.782640 iter 70 value 80.822328 iter 80 value 79.913589 iter 90 value 79.857543 iter 100 value 79.787651 final value 79.787651 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 96.876989 final value 94.486237 converged Fitting Repeat 2 # weights: 103 initial value 95.731062 final value 94.485663 converged Fitting Repeat 3 # weights: 103 initial value 95.914983 final value 94.485726 converged Fitting Repeat 4 # weights: 103 initial value 96.994135 iter 10 value 94.485908 final value 94.484278 converged Fitting Repeat 5 # weights: 103 initial value 98.864897 iter 10 value 94.468252 iter 20 value 94.467170 final value 94.466877 converged Fitting Repeat 1 # weights: 305 initial value 94.824872 iter 10 value 94.489118 iter 20 value 94.484235 iter 30 value 94.339899 iter 40 value 92.285429 iter 50 value 91.975537 iter 60 value 91.290723 iter 70 value 91.289523 iter 80 value 91.289218 iter 90 value 91.288653 iter 100 value 85.599246 final value 85.599246 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.547454 iter 10 value 94.489509 iter 20 value 94.436457 iter 30 value 84.503078 final value 83.678465 converged Fitting Repeat 3 # weights: 305 initial value 107.596710 iter 10 value 94.488784 iter 20 value 93.793864 iter 30 value 87.170116 iter 40 value 83.055151 iter 50 value 82.991603 iter 60 value 81.750071 iter 70 value 79.819812 iter 80 value 79.331501 iter 90 value 79.293487 final value 79.293032 converged Fitting Repeat 4 # weights: 305 initial value 102.166471 iter 10 value 94.490180 iter 20 value 94.304552 iter 30 value 83.732357 iter 40 value 83.731265 iter 50 value 83.730982 iter 50 value 83.730981 iter 50 value 83.730981 final value 83.730981 converged Fitting Repeat 5 # weights: 305 initial value 95.306149 iter 10 value 94.488554 iter 20 value 92.300718 iter 30 value 86.303429 iter 40 value 85.919066 iter 50 value 85.911704 iter 60 value 85.910844 final value 85.909345 converged Fitting Repeat 1 # weights: 507 initial value 100.755522 iter 10 value 94.492103 iter 20 value 94.299360 iter 30 value 88.901845 iter 40 value 86.043212 iter 50 value 83.482237 iter 60 value 83.477947 iter 70 value 83.477081 final value 83.476645 converged Fitting Repeat 2 # weights: 507 initial value 99.824106 iter 10 value 94.491321 iter 20 value 94.484239 iter 30 value 94.003812 iter 40 value 91.868073 iter 50 value 91.615043 iter 60 value 83.898624 iter 70 value 82.514069 iter 80 value 82.508359 iter 90 value 82.457638 iter 100 value 82.178302 final value 82.178302 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 96.777018 iter 10 value 94.492338 iter 20 value 94.447724 iter 30 value 93.951886 iter 40 value 93.521623 iter 50 value 93.463579 iter 60 value 93.461423 final value 93.461352 converged Fitting Repeat 4 # weights: 507 initial value 106.342538 iter 10 value 94.475539 iter 20 value 94.467950 final value 94.466985 converged Fitting Repeat 5 # weights: 507 initial value 99.243919 iter 10 value 94.492996 iter 20 value 94.484812 iter 30 value 93.671716 iter 40 value 93.115192 iter 50 value 93.112725 final value 93.111455 converged Fitting Repeat 1 # weights: 305 initial value 125.208290 iter 10 value 117.848864 iter 20 value 116.753720 iter 30 value 107.700617 iter 40 value 106.283358 iter 50 value 105.517128 iter 60 value 105.247672 iter 70 value 105.070186 iter 80 value 104.981381 iter 90 value 104.368496 iter 100 value 102.778279 final value 102.778279 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 129.659506 iter 10 value 117.580599 iter 20 value 107.639202 iter 30 value 104.846727 iter 40 value 104.573799 iter 50 value 104.326043 iter 60 value 104.070462 iter 70 value 103.269560 iter 80 value 102.266612 iter 90 value 101.791295 iter 100 value 101.634369 final value 101.634369 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 124.150259 iter 10 value 114.966036 iter 20 value 106.986011 iter 30 value 105.502426 iter 40 value 103.826965 iter 50 value 102.682158 iter 60 value 102.551108 iter 70 value 102.137673 iter 80 value 101.615582 iter 90 value 101.369495 iter 100 value 101.241449 final value 101.241449 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 132.159450 iter 10 value 117.930228 iter 20 value 108.528889 iter 30 value 106.491474 iter 40 value 103.976329 iter 50 value 102.126758 iter 60 value 101.639328 iter 70 value 101.556484 iter 80 value 101.111279 iter 90 value 100.967520 iter 100 value 100.865990 final value 100.865990 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 135.115948 iter 10 value 117.954982 iter 20 value 117.875664 iter 30 value 107.782290 iter 40 value 105.470581 iter 50 value 104.194660 iter 60 value 103.716174 iter 70 value 102.631250 iter 80 value 102.330611 iter 90 value 102.325684 iter 100 value 102.308014 final value 102.308014 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Wed Mar 27 23:27:04 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 41.673 1.646 43.788
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 34.589 | 0.605 | 35.195 | |
FreqInteractors | 0.225 | 0.011 | 0.237 | |
calculateAAC | 0.040 | 0.000 | 0.039 | |
calculateAutocor | 0.304 | 0.020 | 0.325 | |
calculateCTDC | 0.071 | 0.000 | 0.072 | |
calculateCTDD | 0.552 | 0.004 | 0.557 | |
calculateCTDT | 0.232 | 0.004 | 0.237 | |
calculateCTriad | 0.420 | 0.004 | 0.424 | |
calculateDC | 0.081 | 0.003 | 0.085 | |
calculateF | 0.285 | 0.013 | 0.298 | |
calculateKSAAP | 0.086 | 0.003 | 0.090 | |
calculateQD_Sm | 1.956 | 0.024 | 2.023 | |
calculateTC | 1.557 | 0.036 | 1.592 | |
calculateTC_Sm | 0.241 | 0.005 | 0.245 | |
corr_plot | 34.046 | 0.391 | 34.440 | |
enrichfindP | 0.533 | 0.048 | 9.588 | |
enrichfind_hp | 0.091 | 0.020 | 1.093 | |
enrichplot | 0.318 | 0.044 | 0.362 | |
filter_missing_values | 0.001 | 0.000 | 0.002 | |
getFASTA | 0.415 | 0.016 | 4.827 | |
getHPI | 0.001 | 0.000 | 0.001 | |
get_negativePPI | 0.002 | 0.000 | 0.002 | |
get_positivePPI | 0 | 0 | 0 | |
impute_missing_data | 0.001 | 0.000 | 0.001 | |
plotPPI | 0.072 | 0.000 | 0.072 | |
pred_ensembel | 13.486 | 0.638 | 10.724 | |
var_imp | 35.542 | 1.044 | 36.587 | |