Back to Multiple platform build/check report for BioC 3.18: simplified long |
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This page was generated on 2024-03-29 11:37:49 -0400 (Fri, 29 Mar 2024).
Hostname | OS | Arch (*) | R version | Installed pkgs |
---|---|---|---|---|
nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4669 |
palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" | 4404 |
merida1 | macOS 12.7.1 Monterey | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4427 |
Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X |
Package 974/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
HPiP 1.8.0 (landing page) Matineh Rahmatbakhsh
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | OK | |||||||||
palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | OK | OK | |||||||||
merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | OK | OK | |||||||||
kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
To the developers/maintainers of the HPiP package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/HPiP.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
Package: HPiP |
Version: 1.8.0 |
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.8.0.tar.gz |
StartedAt: 2024-03-28 04:03:24 -0400 (Thu, 28 Mar 2024) |
EndedAt: 2024-03-28 04:11:33 -0400 (Thu, 28 Mar 2024) |
EllapsedTime: 488.9 seconds |
RetCode: 0 |
Status: OK |
CheckDir: HPiP.Rcheck |
Warnings: 0 |
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD check --install=check:HPiP.install-out.txt --library=/Library/Frameworks/R.framework/Resources/library --no-vignettes --timings HPiP_1.8.0.tar.gz ### ############################################################################## ############################################################################## * using log directory ‘/Users/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck’ * using R version 4.3.3 (2024-02-29) * using platform: x86_64-apple-darwin20 (64-bit) * R was compiled by Apple clang version 14.0.0 (clang-1400.0.29.202) GNU Fortran (GCC) 12.2.0 * running under: macOS Monterey 12.7.1 * using session charset: UTF-8 * using option ‘--no-vignettes’ * checking for file ‘HPiP/DESCRIPTION’ ... OK * checking extension type ... Package * this is package ‘HPiP’ version ‘1.8.0’ * package encoding: UTF-8 * checking package namespace information ... OK * checking package dependencies ... OK * checking if this is a source package ... OK * checking if there is a namespace ... OK * checking for hidden files and directories ... OK * checking for portable file names ... OK * checking for sufficient/correct file permissions ... OK * checking whether package ‘HPiP’ can be installed ... OK * checking installed package size ... OK * checking package directory ... OK * checking ‘build’ directory ... OK * checking DESCRIPTION meta-information ... OK * checking top-level files ... OK * checking for left-over files ... OK * checking index information ... OK * checking package subdirectories ... OK * checking R files for non-ASCII characters ... OK * checking R files for syntax errors ... OK * checking whether the package can be loaded ... OK * checking whether the package can be loaded with stated dependencies ... OK * checking whether the package can be unloaded cleanly ... OK * checking whether the namespace can be loaded with stated dependencies ... OK * checking whether the namespace can be unloaded cleanly ... OK * checking dependencies in R code ... OK * checking S3 generic/method consistency ... OK * checking replacement functions ... OK * checking foreign function calls ... OK * checking R code for possible problems ... OK * checking Rd files ... OK * checking Rd metadata ... OK * checking Rd cross-references ... NOTE Package unavailable to check Rd xrefs: ‘ftrCOOL’ * checking for missing documentation entries ... OK * checking for code/documentation mismatches ... OK * checking Rd \usage sections ... OK * checking Rd contents ... OK * checking for unstated dependencies in examples ... OK * checking contents of ‘data’ directory ... OK * checking data for non-ASCII characters ... OK * checking data for ASCII and uncompressed saves ... OK * checking R/sysdata.rda ... OK * checking files in ‘vignettes’ ... OK * checking examples ... OK Examples with CPU (user + system) or elapsed time > 5s user system elapsed var_imp 51.830 1.996 59.498 corr_plot 50.555 1.919 56.184 FSmethod 50.351 1.884 56.212 pred_ensembel 23.332 0.483 20.109 calculateTC 4.339 0.455 5.152 enrichfindP 0.875 0.098 15.652 * checking for unstated dependencies in ‘tests’ ... OK * checking tests ... Running ‘runTests.R’ OK * checking for unstated dependencies in vignettes ... OK * checking package vignettes in ‘inst/doc’ ... OK * checking running R code from vignettes ... SKIPPED * checking re-building of vignette outputs ... SKIPPED * checking PDF version of manual ... OK * DONE Status: 1 NOTE See ‘/Users/biocbuild/bbs-3.18-bioc/meat/HPiP.Rcheck/00check.log’ for details.
HPiP.Rcheck/00install.out
############################################################################## ############################################################################## ### ### Running command: ### ### /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL HPiP ### ############################################################################## ############################################################################## * installing to library ‘/Library/Frameworks/R.framework/Versions/4.3-x86_64/Resources/library’ * installing *source* package ‘HPiP’ ... ** using staged installation ** R ** data ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location ** testing if installed package can be loaded from final location ** testing if installed package keeps a record of temporary installation path * DONE (HPiP)
HPiP.Rcheck/tests/runTests.Rout
R version 4.3.3 (2024-02-29) -- "Angel Food Cake" Copyright (C) 2024 The R Foundation for Statistical Computing Platform: x86_64-apple-darwin20 (64-bit) R is free software and comes with ABSOLUTELY NO WARRANTY. You are welcome to redistribute it under certain conditions. Type 'license()' or 'licence()' for distribution details. R is a collaborative project with many contributors. Type 'contributors()' for more information and 'citation()' on how to cite R or R packages in publications. Type 'demo()' for some demos, 'help()' for on-line help, or 'help.start()' for an HTML browser interface to help. Type 'q()' to quit R. > BiocGenerics:::testPackage('HPiP') No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE No results to show Please make sure that the organism is correct or set significant = FALSE avNNet Loading required package: ggplot2 Loading required package: lattice Fitting Repeat 1 # weights: 103 initial value 97.195864 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 104.962736 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 101.983775 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 104.061711 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 98.771225 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 118.517467 iter 10 value 94.144525 final value 94.144481 converged Fitting Repeat 2 # weights: 305 initial value 97.603468 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 98.158138 final value 94.466823 converged Fitting Repeat 4 # weights: 305 initial value 98.784942 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 122.206982 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 95.184798 iter 10 value 94.421972 final value 94.117498 converged Fitting Repeat 2 # weights: 507 initial value 94.822183 iter 10 value 93.199746 iter 20 value 93.011115 iter 30 value 92.999729 final value 92.999564 converged Fitting Repeat 3 # weights: 507 initial value 98.723901 iter 10 value 93.964832 iter 20 value 93.776162 iter 30 value 90.985495 iter 40 value 87.119533 iter 50 value 86.446514 iter 60 value 86.312405 iter 70 value 82.593729 final value 82.593414 converged Fitting Repeat 4 # weights: 507 initial value 101.886394 final value 94.466823 converged Fitting Repeat 5 # weights: 507 initial value 106.983488 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 103.913850 iter 10 value 94.488301 iter 20 value 93.953824 iter 30 value 93.926626 iter 40 value 93.920979 iter 50 value 92.489962 iter 60 value 89.323118 iter 70 value 88.988119 iter 80 value 88.979113 iter 90 value 88.968395 iter 100 value 84.661029 final value 84.661029 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.059219 iter 10 value 94.264608 iter 20 value 87.448692 iter 30 value 86.465003 iter 40 value 86.426242 iter 50 value 85.796259 iter 60 value 83.520348 iter 70 value 83.250093 final value 83.246389 converged Fitting Repeat 3 # weights: 103 initial value 108.948403 iter 10 value 94.528911 iter 20 value 94.488025 iter 30 value 94.272577 iter 40 value 91.824803 iter 50 value 91.662308 iter 60 value 89.011826 iter 70 value 84.249094 iter 80 value 82.954676 iter 90 value 81.926118 iter 100 value 81.841968 final value 81.841968 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 109.007407 iter 10 value 94.446018 iter 20 value 93.991722 iter 30 value 93.646207 iter 40 value 91.469078 iter 50 value 91.430940 iter 60 value 86.294189 iter 70 value 83.086856 iter 80 value 83.003569 iter 90 value 82.903814 final value 82.902341 converged Fitting Repeat 5 # weights: 103 initial value 97.949072 iter 10 value 92.082269 iter 20 value 86.046507 iter 30 value 85.396867 iter 40 value 84.122510 iter 50 value 83.764904 iter 60 value 83.583172 iter 70 value 83.366666 iter 80 value 83.326590 final value 83.326567 converged Fitting Repeat 1 # weights: 305 initial value 106.078621 iter 10 value 94.472489 iter 20 value 87.318553 iter 30 value 84.962708 iter 40 value 84.005965 iter 50 value 83.312781 iter 60 value 83.053525 iter 70 value 82.968150 iter 80 value 82.862140 iter 90 value 82.179333 iter 100 value 81.822133 final value 81.822133 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 99.063052 iter 10 value 94.083555 iter 20 value 88.040681 iter 30 value 85.853151 iter 40 value 84.163988 iter 50 value 83.461784 iter 60 value 83.271796 iter 70 value 83.082091 iter 80 value 83.022296 iter 90 value 83.017239 iter 100 value 82.969047 final value 82.969047 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 113.463035 iter 10 value 95.120200 iter 20 value 94.626286 iter 30 value 92.665808 iter 40 value 86.915856 iter 50 value 86.598424 iter 60 value 86.353835 iter 70 value 85.911212 iter 80 value 83.927847 iter 90 value 83.175659 iter 100 value 82.474444 final value 82.474444 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 106.133402 iter 10 value 85.507773 iter 20 value 83.512255 iter 30 value 82.777715 iter 40 value 81.670538 iter 50 value 81.229792 iter 60 value 80.846862 iter 70 value 80.634824 iter 80 value 80.551240 iter 90 value 80.546214 iter 100 value 80.543539 final value 80.543539 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.569529 iter 10 value 94.007050 iter 20 value 88.450515 iter 30 value 86.614911 iter 40 value 86.006746 iter 50 value 85.322656 iter 60 value 84.526570 iter 70 value 83.303561 iter 80 value 82.709036 iter 90 value 82.635368 iter 100 value 82.613139 final value 82.613139 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 128.936859 iter 10 value 94.403738 iter 20 value 89.471250 iter 30 value 84.475277 iter 40 value 83.850601 iter 50 value 83.537869 iter 60 value 83.120503 iter 70 value 82.812030 iter 80 value 82.434930 iter 90 value 81.670494 iter 100 value 81.434234 final value 81.434234 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 109.794002 iter 10 value 94.490817 iter 20 value 94.116735 iter 30 value 87.187358 iter 40 value 85.523347 iter 50 value 85.011025 iter 60 value 81.909260 iter 70 value 81.553870 iter 80 value 81.181145 iter 90 value 81.044464 iter 100 value 80.978415 final value 80.978415 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 109.831856 iter 10 value 94.526252 iter 20 value 91.919502 iter 30 value 83.259932 iter 40 value 81.762898 iter 50 value 81.271671 iter 60 value 80.945263 iter 70 value 80.717341 iter 80 value 80.519412 iter 90 value 80.425102 iter 100 value 80.400677 final value 80.400677 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.720812 iter 10 value 95.870878 iter 20 value 85.540179 iter 30 value 84.940938 iter 40 value 84.831748 iter 50 value 84.523599 iter 60 value 82.670431 iter 70 value 82.350509 iter 80 value 81.525269 iter 90 value 80.865162 iter 100 value 80.673121 final value 80.673121 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 119.914733 iter 10 value 94.408020 iter 20 value 92.965300 iter 30 value 87.359712 iter 40 value 86.477269 iter 50 value 84.655209 iter 60 value 83.721508 iter 70 value 83.009143 iter 80 value 82.499883 iter 90 value 81.170251 iter 100 value 80.582061 final value 80.582061 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 104.768875 final value 94.485989 converged Fitting Repeat 2 # weights: 103 initial value 97.927915 final value 94.485654 converged Fitting Repeat 3 # weights: 103 initial value 107.685393 iter 10 value 94.461893 iter 20 value 94.455106 iter 30 value 91.135211 iter 40 value 83.976953 iter 50 value 82.565027 iter 60 value 82.526037 iter 70 value 82.525630 iter 80 value 82.525210 final value 82.524813 converged Fitting Repeat 4 # weights: 103 initial value 95.963220 final value 94.485813 converged Fitting Repeat 5 # weights: 103 initial value 95.319190 iter 10 value 93.302009 iter 20 value 93.301537 iter 30 value 88.596732 iter 40 value 82.110059 iter 50 value 81.989167 iter 60 value 81.988189 final value 81.988182 converged Fitting Repeat 1 # weights: 305 initial value 95.481827 iter 10 value 94.149328 iter 20 value 94.144845 iter 30 value 94.119238 iter 40 value 93.911583 iter 50 value 93.795332 iter 60 value 93.794490 iter 70 value 93.726806 final value 93.723216 converged Fitting Repeat 2 # weights: 305 initial value 97.094281 iter 10 value 94.471740 iter 20 value 94.467319 final value 94.467280 converged Fitting Repeat 3 # weights: 305 initial value 114.831503 iter 10 value 94.489213 iter 20 value 94.182179 iter 30 value 94.151919 iter 40 value 86.995514 iter 50 value 84.465639 iter 60 value 84.346642 iter 70 value 84.303683 final value 84.303273 converged Fitting Repeat 4 # weights: 305 initial value 99.751663 iter 10 value 88.114996 iter 20 value 82.506662 iter 30 value 82.355991 iter 40 value 82.284197 iter 50 value 82.276254 iter 60 value 82.274691 iter 70 value 82.272332 iter 70 value 82.272332 final value 82.272332 converged Fitting Repeat 5 # weights: 305 initial value 100.280919 iter 10 value 94.471868 iter 20 value 94.471115 iter 30 value 94.467000 iter 40 value 91.826717 iter 50 value 84.838218 iter 60 value 84.833746 iter 70 value 84.830664 iter 80 value 83.165485 iter 90 value 82.603945 iter 100 value 81.979361 final value 81.979361 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 136.777841 iter 10 value 94.475067 iter 20 value 94.416871 iter 30 value 85.286423 iter 40 value 84.120362 iter 50 value 83.938672 iter 60 value 83.671452 iter 70 value 83.666732 final value 83.664750 converged Fitting Repeat 2 # weights: 507 initial value 106.950519 iter 10 value 93.992523 iter 20 value 93.879412 iter 30 value 93.813542 iter 40 value 92.071760 iter 50 value 90.565606 iter 60 value 90.555100 iter 70 value 90.551880 iter 80 value 90.551401 iter 90 value 90.550258 iter 100 value 90.549981 final value 90.549981 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 103.245418 iter 10 value 94.492479 iter 20 value 94.482966 iter 30 value 94.196305 iter 40 value 85.511129 iter 50 value 84.800700 iter 60 value 84.798932 iter 70 value 84.795836 iter 80 value 83.377326 iter 90 value 81.745639 iter 100 value 81.707374 final value 81.707374 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 104.557995 iter 10 value 94.492547 iter 20 value 94.483873 iter 30 value 85.553048 iter 40 value 85.544988 iter 50 value 84.667466 iter 60 value 84.620225 final value 84.610878 converged Fitting Repeat 5 # weights: 507 initial value 97.734931 iter 10 value 92.238470 iter 20 value 92.235340 iter 30 value 92.228092 iter 40 value 92.223559 iter 50 value 91.970164 iter 60 value 91.967564 iter 60 value 91.967563 iter 60 value 91.967563 final value 91.967563 converged Fitting Repeat 1 # weights: 103 initial value 96.762859 final value 94.466823 converged Fitting Repeat 2 # weights: 103 initial value 103.614796 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 100.361532 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 103.326411 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 98.981722 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 96.851261 final value 94.466823 converged Fitting Repeat 2 # weights: 305 initial value 102.992334 final value 94.466823 converged Fitting Repeat 3 # weights: 305 initial value 96.695869 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 109.791909 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 105.707982 final value 94.466823 converged Fitting Repeat 1 # weights: 507 initial value 98.416909 final value 94.484211 converged Fitting Repeat 2 # weights: 507 initial value 124.389183 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 96.286756 iter 10 value 92.398876 iter 20 value 92.296314 final value 92.296071 converged Fitting Repeat 4 # weights: 507 initial value 100.023357 final value 94.466823 converged Fitting Repeat 5 # weights: 507 initial value 110.945678 final value 94.484211 converged Fitting Repeat 1 # weights: 103 initial value 105.347585 iter 10 value 94.483749 iter 20 value 90.886995 iter 30 value 87.973248 iter 40 value 85.792919 iter 50 value 83.633247 iter 60 value 83.418972 iter 70 value 82.891736 iter 80 value 82.726782 iter 90 value 82.213609 iter 100 value 81.921526 final value 81.921526 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 99.498890 iter 10 value 94.487935 iter 20 value 94.327855 iter 30 value 88.209252 iter 40 value 85.256552 iter 50 value 84.955737 iter 60 value 82.583664 iter 70 value 82.277226 iter 80 value 82.273562 final value 82.270225 converged Fitting Repeat 3 # weights: 103 initial value 101.877837 iter 10 value 94.486694 iter 20 value 93.519291 iter 30 value 85.926570 iter 40 value 85.111616 iter 50 value 84.936357 iter 60 value 82.633699 iter 70 value 82.545493 iter 80 value 82.405419 iter 90 value 82.017474 iter 100 value 81.933344 final value 81.933344 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 100.750859 iter 10 value 94.486478 iter 20 value 89.402975 iter 30 value 85.029916 iter 40 value 84.780490 iter 50 value 84.663497 iter 60 value 84.595689 final value 84.595337 converged Fitting Repeat 5 # weights: 103 initial value 101.669914 iter 10 value 93.614051 iter 20 value 85.443333 iter 30 value 84.855308 iter 40 value 84.724597 iter 50 value 84.675279 iter 60 value 84.605605 iter 70 value 84.594647 final value 84.593355 converged Fitting Repeat 1 # weights: 305 initial value 122.824968 iter 10 value 97.423582 iter 20 value 94.521946 iter 30 value 94.514475 iter 40 value 87.263650 iter 50 value 86.813847 iter 60 value 85.963083 iter 70 value 85.413412 iter 80 value 84.015555 iter 90 value 83.802609 iter 100 value 83.734670 final value 83.734670 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 110.008449 iter 10 value 94.265259 iter 20 value 88.793131 iter 30 value 88.296845 iter 40 value 86.409062 iter 50 value 85.506934 iter 60 value 84.484622 iter 70 value 83.746164 iter 80 value 81.610135 iter 90 value 80.727028 iter 100 value 80.433797 final value 80.433797 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.225021 iter 10 value 94.589344 iter 20 value 90.735091 iter 30 value 86.717746 iter 40 value 85.723441 iter 50 value 83.952100 iter 60 value 83.471011 iter 70 value 82.957014 iter 80 value 82.076986 iter 90 value 80.944334 iter 100 value 80.408491 final value 80.408491 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 111.439949 iter 10 value 92.469770 iter 20 value 85.933094 iter 30 value 84.920917 iter 40 value 84.058404 iter 50 value 83.605265 iter 60 value 83.385213 iter 70 value 82.716625 iter 80 value 81.461551 iter 90 value 80.640083 iter 100 value 80.153844 final value 80.153844 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.066309 iter 10 value 94.571556 iter 20 value 87.759014 iter 30 value 87.556765 iter 40 value 85.276716 iter 50 value 85.087358 iter 60 value 83.344946 iter 70 value 82.829457 iter 80 value 82.355845 iter 90 value 82.006249 iter 100 value 81.627152 final value 81.627152 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.985060 iter 10 value 96.342415 iter 20 value 94.585941 iter 30 value 93.002417 iter 40 value 92.674434 iter 50 value 91.817844 iter 60 value 89.965867 iter 70 value 87.110679 iter 80 value 86.369875 iter 90 value 84.031688 iter 100 value 83.148730 final value 83.148730 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 107.557748 iter 10 value 94.594835 iter 20 value 94.354923 iter 30 value 92.830617 iter 40 value 89.442802 iter 50 value 85.552700 iter 60 value 83.052304 iter 70 value 81.839436 iter 80 value 81.308262 iter 90 value 81.013678 iter 100 value 80.920827 final value 80.920827 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 114.037100 iter 10 value 95.374865 iter 20 value 88.204239 iter 30 value 86.225912 iter 40 value 85.718976 iter 50 value 85.290040 iter 60 value 84.151405 iter 70 value 83.755998 iter 80 value 83.714893 iter 90 value 83.462908 iter 100 value 82.383301 final value 82.383301 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 113.075617 iter 10 value 95.160840 iter 20 value 94.411208 iter 30 value 86.922234 iter 40 value 85.511614 iter 50 value 84.980469 iter 60 value 84.731765 iter 70 value 83.376174 iter 80 value 82.047730 iter 90 value 80.990720 iter 100 value 80.489677 final value 80.489677 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 103.187414 iter 10 value 94.494802 iter 20 value 92.588795 iter 30 value 84.764272 iter 40 value 84.664253 iter 50 value 84.501022 iter 60 value 84.405109 iter 70 value 83.539966 iter 80 value 81.953540 iter 90 value 80.750469 iter 100 value 80.580919 final value 80.580919 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.180544 final value 94.485930 converged Fitting Repeat 2 # weights: 103 initial value 97.807808 final value 94.486043 converged Fitting Repeat 3 # weights: 103 initial value 96.862102 final value 94.485925 converged Fitting Repeat 4 # weights: 103 initial value 100.757969 iter 10 value 94.495246 iter 20 value 92.025643 iter 30 value 87.289909 iter 40 value 87.289732 iter 50 value 85.327880 iter 60 value 85.211053 iter 70 value 85.209943 final value 85.209689 converged Fitting Repeat 5 # weights: 103 initial value 95.586901 iter 10 value 92.855984 iter 20 value 92.854852 iter 30 value 92.853705 iter 40 value 91.978841 iter 50 value 91.913491 iter 60 value 91.911245 iter 70 value 91.910609 final value 91.910559 converged Fitting Repeat 1 # weights: 305 initial value 94.772226 iter 10 value 94.488217 iter 20 value 94.471458 iter 30 value 88.755386 final value 88.729376 converged Fitting Repeat 2 # weights: 305 initial value 98.154007 iter 10 value 92.756327 iter 20 value 92.753265 iter 30 value 91.035542 iter 40 value 88.768810 final value 88.768805 converged Fitting Repeat 3 # weights: 305 initial value 97.269997 iter 10 value 94.488764 iter 20 value 94.378952 iter 30 value 86.966462 iter 40 value 85.907984 final value 85.907786 converged Fitting Repeat 4 # weights: 305 initial value 106.123989 iter 10 value 92.304282 iter 20 value 92.227014 iter 30 value 92.187621 iter 40 value 92.147005 iter 50 value 91.961406 iter 60 value 90.580917 iter 70 value 90.469154 iter 80 value 90.419895 iter 90 value 90.416451 iter 100 value 90.416394 final value 90.416394 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.385931 iter 10 value 92.790995 iter 20 value 92.784372 iter 30 value 85.532924 iter 40 value 85.273768 iter 50 value 85.202920 final value 85.201867 converged Fitting Repeat 1 # weights: 507 initial value 116.120386 iter 10 value 94.493458 iter 20 value 94.485304 iter 30 value 93.950037 iter 40 value 87.652365 iter 50 value 83.497503 iter 60 value 83.432417 iter 70 value 83.262438 iter 80 value 82.986939 iter 90 value 82.315044 iter 100 value 78.840812 final value 78.840812 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 100.353732 iter 10 value 94.491944 iter 20 value 94.479323 iter 30 value 91.739849 iter 40 value 87.954276 iter 50 value 84.183124 iter 60 value 81.307719 iter 70 value 81.191163 iter 80 value 81.130811 iter 90 value 81.129417 iter 90 value 81.129417 final value 81.129417 converged Fitting Repeat 3 # weights: 507 initial value 103.396609 iter 10 value 94.492156 iter 20 value 94.469967 iter 30 value 89.294396 iter 40 value 86.725951 iter 50 value 86.309919 iter 60 value 86.308364 iter 70 value 85.254700 iter 80 value 83.577433 iter 90 value 83.444648 iter 100 value 83.444227 final value 83.444227 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 101.624594 iter 10 value 87.740722 iter 20 value 87.659441 iter 30 value 85.691176 iter 40 value 85.681150 iter 50 value 85.680536 iter 60 value 83.848281 iter 70 value 82.448590 iter 80 value 82.103300 iter 90 value 82.103060 iter 100 value 82.102874 final value 82.102874 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 100.396144 iter 10 value 94.493370 iter 20 value 94.484134 iter 30 value 91.294881 iter 40 value 82.756696 iter 50 value 79.718222 iter 60 value 79.307366 iter 70 value 79.219715 iter 80 value 79.218863 final value 79.218738 converged Fitting Repeat 1 # weights: 103 initial value 96.809648 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 96.847212 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 94.513310 iter 10 value 90.093274 iter 20 value 87.446983 iter 30 value 87.275560 iter 40 value 86.875857 iter 50 value 84.616961 final value 84.609495 converged Fitting Repeat 4 # weights: 103 initial value 104.444782 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 99.352484 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 94.292760 iter 10 value 86.633346 iter 20 value 84.505225 iter 30 value 82.028206 iter 40 value 81.940059 iter 50 value 81.938785 final value 81.938342 converged Fitting Repeat 2 # weights: 305 initial value 96.932687 final value 94.052910 converged Fitting Repeat 3 # weights: 305 initial value 95.846559 iter 10 value 88.022264 final value 87.553922 converged Fitting Repeat 4 # weights: 305 initial value 105.510618 final value 94.052910 converged Fitting Repeat 5 # weights: 305 initial value 124.394664 iter 10 value 94.052910 iter 10 value 94.052910 iter 10 value 94.052910 final value 94.052910 converged Fitting Repeat 1 # weights: 507 initial value 110.749883 iter 10 value 89.699796 iter 20 value 87.391838 iter 30 value 87.388699 final value 87.388692 converged Fitting Repeat 2 # weights: 507 initial value 100.381501 final value 92.945355 converged Fitting Repeat 3 # weights: 507 initial value 101.041486 iter 10 value 94.053056 final value 94.052910 converged Fitting Repeat 4 # weights: 507 initial value 111.101954 iter 10 value 92.945376 final value 92.945355 converged Fitting Repeat 5 # weights: 507 initial value 119.132810 final value 92.945356 converged Fitting Repeat 1 # weights: 103 initial value 103.066593 iter 10 value 93.361500 iter 20 value 92.552892 iter 30 value 91.108920 iter 40 value 86.624933 iter 50 value 86.363458 iter 60 value 84.014396 iter 70 value 83.498498 final value 83.495838 converged Fitting Repeat 2 # weights: 103 initial value 106.087437 iter 10 value 94.051774 iter 20 value 93.237769 iter 30 value 93.230833 iter 40 value 92.809100 iter 50 value 91.619151 iter 60 value 87.775330 iter 70 value 86.867875 iter 80 value 84.139674 iter 90 value 84.050913 iter 100 value 84.011814 final value 84.011814 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 99.424605 iter 10 value 94.043131 iter 20 value 93.626101 iter 30 value 93.439455 iter 40 value 93.005239 iter 50 value 92.705764 iter 60 value 89.201854 iter 70 value 87.043807 iter 80 value 86.252679 iter 90 value 82.214600 iter 100 value 81.569560 final value 81.569560 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 104.728450 iter 10 value 94.057079 iter 20 value 93.629120 iter 30 value 93.286943 iter 40 value 93.232121 iter 50 value 92.749171 iter 60 value 91.158058 iter 70 value 87.651533 iter 80 value 82.751503 iter 90 value 82.516824 iter 100 value 82.300946 final value 82.300946 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 99.689613 iter 10 value 94.056602 iter 20 value 93.399531 iter 30 value 93.002991 iter 40 value 92.840887 iter 50 value 92.788697 iter 60 value 92.100137 iter 70 value 82.746298 iter 80 value 81.954885 iter 90 value 81.807979 iter 100 value 81.490646 final value 81.490646 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 102.088154 iter 10 value 94.073359 iter 20 value 88.924860 iter 30 value 86.456847 iter 40 value 84.296024 iter 50 value 82.219433 iter 60 value 80.421586 iter 70 value 80.298420 iter 80 value 79.994917 iter 90 value 79.476873 iter 100 value 79.116535 final value 79.116535 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 104.895096 iter 10 value 94.103923 iter 20 value 85.699428 iter 30 value 83.949410 iter 40 value 82.927983 iter 50 value 82.200822 iter 60 value 82.120722 iter 70 value 82.102640 iter 80 value 82.086133 iter 90 value 82.058489 iter 100 value 81.662189 final value 81.662189 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 101.785692 iter 10 value 94.130814 iter 20 value 93.281149 iter 30 value 92.524399 iter 40 value 85.954886 iter 50 value 83.365619 iter 60 value 81.496153 iter 70 value 80.430026 iter 80 value 79.362306 iter 90 value 79.151677 iter 100 value 79.123933 final value 79.123933 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 112.381669 iter 10 value 94.246417 iter 20 value 90.142067 iter 30 value 83.104621 iter 40 value 82.726820 iter 50 value 82.208997 iter 60 value 80.276889 iter 70 value 79.472762 iter 80 value 79.155901 iter 90 value 79.081031 iter 100 value 79.058352 final value 79.058352 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 104.879640 iter 10 value 93.783753 iter 20 value 87.709711 iter 30 value 85.665602 iter 40 value 84.053339 iter 50 value 82.632993 iter 60 value 81.815126 iter 70 value 80.415989 iter 80 value 79.559011 iter 90 value 79.122922 iter 100 value 78.993560 final value 78.993560 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 106.463343 iter 10 value 94.943792 iter 20 value 93.365133 iter 30 value 88.918817 iter 40 value 86.909235 iter 50 value 85.257918 iter 60 value 81.914818 iter 70 value 79.270353 iter 80 value 78.932069 iter 90 value 78.820406 iter 100 value 78.732455 final value 78.732455 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 123.606992 iter 10 value 94.019297 iter 20 value 85.999408 iter 30 value 84.621865 iter 40 value 83.154532 iter 50 value 82.870861 iter 60 value 82.805585 iter 70 value 82.291040 iter 80 value 81.552171 iter 90 value 81.107106 iter 100 value 80.428428 final value 80.428428 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 115.332079 iter 10 value 93.200709 iter 20 value 86.806674 iter 30 value 84.754419 iter 40 value 82.750281 iter 50 value 81.543204 iter 60 value 81.156645 iter 70 value 80.727824 iter 80 value 80.486912 iter 90 value 80.374838 iter 100 value 80.216772 final value 80.216772 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 109.518945 iter 10 value 92.987112 iter 20 value 92.763395 iter 30 value 88.688851 iter 40 value 86.747694 iter 50 value 81.686907 iter 60 value 80.268538 iter 70 value 79.325260 iter 80 value 79.059001 iter 90 value 78.720990 iter 100 value 78.635708 final value 78.635708 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 108.624787 iter 10 value 93.223477 iter 20 value 88.745234 iter 30 value 84.226110 iter 40 value 83.402471 iter 50 value 81.323691 iter 60 value 80.148906 iter 70 value 79.861500 iter 80 value 79.698622 iter 90 value 79.617235 iter 100 value 79.356832 final value 79.356832 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 105.676438 final value 94.054519 converged Fitting Repeat 2 # weights: 103 initial value 98.443732 final value 94.054626 converged Fitting Repeat 3 # weights: 103 initial value 97.118761 iter 10 value 94.057706 iter 20 value 94.055500 final value 94.052913 converged Fitting Repeat 4 # weights: 103 initial value 95.340518 final value 94.054525 converged Fitting Repeat 5 # weights: 103 initial value 95.061341 final value 94.054626 converged Fitting Repeat 1 # weights: 305 initial value 97.295787 iter 10 value 92.951301 iter 20 value 92.949299 iter 30 value 91.101869 iter 40 value 84.936004 iter 50 value 83.335775 iter 60 value 81.831956 final value 81.817713 converged Fitting Repeat 2 # weights: 305 initial value 97.294497 iter 10 value 94.056772 iter 20 value 93.978763 iter 30 value 92.312918 iter 40 value 92.143578 final value 92.143518 converged Fitting Repeat 3 # weights: 305 initial value 120.159623 iter 10 value 94.057948 iter 20 value 94.022146 iter 30 value 89.294647 iter 40 value 81.182505 iter 50 value 81.058746 iter 60 value 81.029839 iter 70 value 80.664072 iter 80 value 79.937267 iter 90 value 79.542570 iter 100 value 78.311223 final value 78.311223 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 101.485029 iter 10 value 94.057265 iter 20 value 93.353091 iter 30 value 84.240759 iter 40 value 83.983039 iter 50 value 83.713717 final value 83.713625 converged Fitting Repeat 5 # weights: 305 initial value 98.403743 iter 10 value 92.950645 iter 20 value 92.948006 iter 30 value 90.743205 iter 40 value 84.308290 iter 50 value 83.274115 final value 83.274111 converged Fitting Repeat 1 # weights: 507 initial value 96.729674 iter 10 value 94.056339 iter 20 value 93.793778 final value 92.564759 converged Fitting Repeat 2 # weights: 507 initial value 90.849823 iter 10 value 86.521398 iter 20 value 85.510811 iter 30 value 85.506859 iter 40 value 85.505066 iter 50 value 83.344751 iter 60 value 82.654766 iter 70 value 82.472005 iter 80 value 82.471121 iter 90 value 82.229997 iter 100 value 81.961195 final value 81.961195 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 104.217106 iter 10 value 94.057414 iter 20 value 94.056959 iter 30 value 93.977992 iter 40 value 93.681868 iter 50 value 93.673733 iter 60 value 92.559138 iter 70 value 92.551838 iter 80 value 92.516086 iter 90 value 92.515941 iter 100 value 92.495104 final value 92.495104 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 98.404028 iter 10 value 92.953992 iter 20 value 92.952182 iter 30 value 91.896237 iter 40 value 91.631509 iter 50 value 91.629789 iter 60 value 91.629684 iter 70 value 91.629508 iter 80 value 91.432680 iter 90 value 89.632930 iter 100 value 87.315529 final value 87.315529 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 107.918699 iter 10 value 92.953765 iter 20 value 92.950292 iter 30 value 92.504979 iter 40 value 89.993265 iter 50 value 84.809917 iter 60 value 79.536890 iter 70 value 78.697379 iter 80 value 78.668140 iter 90 value 78.603183 iter 100 value 78.270184 final value 78.270184 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 99.186394 final value 94.052910 converged Fitting Repeat 2 # weights: 103 initial value 100.222492 final value 94.052910 converged Fitting Repeat 3 # weights: 103 initial value 102.154979 final value 94.052910 converged Fitting Repeat 4 # weights: 103 initial value 101.170980 final value 94.052910 converged Fitting Repeat 5 # weights: 103 initial value 98.082932 final value 94.052910 converged Fitting Repeat 1 # weights: 305 initial value 97.256725 final value 94.052910 converged Fitting Repeat 2 # weights: 305 initial value 110.139541 final value 94.008696 converged Fitting Repeat 3 # weights: 305 initial value 104.101930 final value 94.052910 converged Fitting Repeat 4 # weights: 305 initial value 102.197615 iter 10 value 93.824616 final value 93.785768 converged Fitting Repeat 5 # weights: 305 initial value 107.735474 iter 10 value 93.860357 final value 93.860355 converged Fitting Repeat 1 # weights: 507 initial value 114.733817 iter 10 value 86.781147 iter 20 value 85.996611 final value 85.531862 converged Fitting Repeat 2 # weights: 507 initial value 102.019197 final value 94.052910 converged Fitting Repeat 3 # weights: 507 initial value 112.445909 final value 94.008696 converged Fitting Repeat 4 # weights: 507 initial value 106.897095 final value 94.052910 converged Fitting Repeat 5 # weights: 507 initial value 96.161715 final value 94.008696 converged Fitting Repeat 1 # weights: 103 initial value 105.958379 iter 10 value 93.874027 iter 20 value 87.098081 iter 30 value 86.590342 iter 40 value 85.769802 iter 50 value 85.479538 iter 60 value 84.992701 iter 70 value 84.958339 iter 80 value 84.955379 iter 90 value 84.954536 iter 90 value 84.954535 iter 90 value 84.954535 final value 84.954535 converged Fitting Repeat 2 # weights: 103 initial value 99.393325 iter 10 value 93.913235 iter 20 value 88.080300 iter 30 value 87.622075 iter 40 value 87.115553 iter 50 value 86.237868 iter 60 value 85.284132 iter 70 value 84.861470 iter 80 value 84.848156 iter 90 value 84.824821 iter 100 value 84.660583 final value 84.660583 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 100.279415 iter 10 value 94.057048 iter 20 value 94.048863 iter 30 value 93.308056 iter 40 value 92.897340 iter 50 value 92.313823 iter 60 value 89.321794 iter 70 value 88.170460 iter 80 value 86.180554 iter 90 value 85.752782 iter 100 value 85.574466 final value 85.574466 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 101.566360 iter 10 value 94.056627 iter 20 value 94.002614 iter 30 value 88.441779 iter 40 value 88.150581 iter 50 value 87.741343 iter 60 value 86.820599 iter 70 value 85.315791 iter 80 value 84.610030 iter 90 value 84.569868 iter 100 value 84.565613 final value 84.565613 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 101.098001 iter 10 value 94.264961 iter 20 value 94.064554 iter 30 value 94.012096 iter 40 value 93.704653 iter 50 value 93.684848 iter 60 value 89.450003 iter 70 value 84.044216 iter 80 value 83.543810 iter 90 value 83.442181 iter 100 value 82.854372 final value 82.854372 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 101.997527 iter 10 value 92.197097 iter 20 value 88.678942 iter 30 value 85.996577 iter 40 value 85.452583 iter 50 value 83.626368 iter 60 value 83.447422 iter 70 value 82.927938 iter 80 value 82.439453 iter 90 value 82.403224 iter 100 value 82.290938 final value 82.290938 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 119.698083 iter 10 value 93.776575 iter 20 value 86.283822 iter 30 value 82.695688 iter 40 value 81.584533 iter 50 value 81.151426 iter 60 value 80.919043 iter 70 value 80.624895 iter 80 value 80.592763 iter 90 value 80.590744 iter 100 value 80.572744 final value 80.572744 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 100.961508 iter 10 value 94.727680 iter 20 value 93.881753 iter 30 value 89.267793 iter 40 value 86.381520 iter 50 value 85.519855 iter 60 value 85.244305 iter 70 value 83.775629 iter 80 value 81.887147 iter 90 value 80.733943 iter 100 value 80.469186 final value 80.469186 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 107.944637 iter 10 value 94.393948 iter 20 value 93.724090 iter 30 value 93.654816 iter 40 value 87.976775 iter 50 value 86.023769 iter 60 value 85.199809 iter 70 value 84.702344 iter 80 value 84.683997 iter 90 value 84.646689 iter 100 value 84.614876 final value 84.614876 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 108.754202 iter 10 value 93.989815 iter 20 value 93.691108 iter 30 value 93.455723 iter 40 value 92.674711 iter 50 value 87.760542 iter 60 value 87.094720 iter 70 value 86.335491 iter 80 value 85.655839 iter 90 value 83.823785 iter 100 value 82.756888 final value 82.756888 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 111.971877 iter 10 value 94.249711 iter 20 value 88.552741 iter 30 value 85.307944 iter 40 value 84.378606 iter 50 value 82.837828 iter 60 value 81.680267 iter 70 value 80.452825 iter 80 value 80.190750 iter 90 value 80.111935 iter 100 value 80.077710 final value 80.077710 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 125.827248 iter 10 value 94.036888 iter 20 value 93.536556 iter 30 value 88.766259 iter 40 value 85.615441 iter 50 value 83.731016 iter 60 value 82.265117 iter 70 value 81.631996 iter 80 value 80.800388 iter 90 value 80.409188 iter 100 value 80.190431 final value 80.190431 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 105.278665 iter 10 value 94.357172 iter 20 value 92.988081 iter 30 value 89.235048 iter 40 value 85.340678 iter 50 value 84.252188 iter 60 value 83.897784 iter 70 value 83.094371 iter 80 value 81.988843 iter 90 value 81.577141 iter 100 value 81.315970 final value 81.315970 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 105.986297 iter 10 value 94.003966 iter 20 value 87.115458 iter 30 value 86.495692 iter 40 value 86.307050 iter 50 value 84.866352 iter 60 value 83.806051 iter 70 value 82.520630 iter 80 value 81.228099 iter 90 value 80.678494 iter 100 value 80.459090 final value 80.459090 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 110.493816 iter 10 value 94.085713 iter 20 value 93.219825 iter 30 value 90.071772 iter 40 value 85.295741 iter 50 value 84.790343 iter 60 value 83.760089 iter 70 value 83.542914 iter 80 value 82.466787 iter 90 value 82.058945 iter 100 value 81.518667 final value 81.518667 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 97.231236 final value 94.054514 converged Fitting Repeat 2 # weights: 103 initial value 97.188687 final value 94.054539 converged Fitting Repeat 3 # weights: 103 initial value 100.843409 final value 94.010295 converged Fitting Repeat 4 # weights: 103 initial value 100.172059 iter 10 value 94.054675 iter 20 value 93.952246 iter 30 value 85.584991 iter 40 value 85.541526 iter 50 value 85.526381 iter 60 value 85.184181 iter 70 value 85.169708 iter 80 value 85.160755 final value 85.160111 converged Fitting Repeat 5 # weights: 103 initial value 99.627407 final value 94.054614 converged Fitting Repeat 1 # weights: 305 initial value 112.260094 iter 10 value 94.057364 iter 20 value 93.930798 iter 30 value 88.306939 iter 40 value 88.210415 iter 50 value 88.209639 iter 60 value 86.902329 iter 70 value 82.363633 iter 80 value 81.488282 iter 90 value 81.486922 final value 81.486714 converged Fitting Repeat 2 # weights: 305 initial value 94.536545 iter 10 value 94.053867 iter 20 value 89.381384 iter 30 value 83.705942 iter 40 value 82.680946 iter 50 value 82.671235 iter 60 value 81.917479 iter 70 value 81.456847 iter 80 value 81.411022 iter 90 value 81.409394 iter 100 value 81.377415 final value 81.377415 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 119.903967 iter 10 value 94.024178 iter 20 value 93.877185 iter 30 value 87.683887 iter 40 value 86.061123 iter 50 value 85.895380 iter 60 value 85.888627 iter 70 value 85.875519 iter 80 value 85.874661 iter 90 value 85.722404 iter 100 value 85.658388 final value 85.658388 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 119.688605 iter 10 value 94.057732 iter 20 value 93.926280 iter 30 value 88.684726 iter 40 value 86.352153 iter 50 value 85.397210 iter 60 value 85.388490 final value 85.388457 converged Fitting Repeat 5 # weights: 305 initial value 95.374168 iter 10 value 94.057791 iter 20 value 94.052915 iter 30 value 93.657701 final value 93.657606 converged Fitting Repeat 1 # weights: 507 initial value 95.055189 iter 10 value 93.610815 iter 20 value 93.107519 iter 30 value 92.922345 iter 40 value 88.784986 iter 50 value 84.626766 iter 60 value 84.301087 iter 70 value 84.129639 iter 80 value 84.123386 iter 90 value 84.122096 iter 100 value 84.120215 final value 84.120215 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 95.391124 iter 10 value 94.017066 iter 20 value 93.752143 iter 30 value 86.178372 iter 40 value 86.038556 iter 50 value 86.037775 iter 60 value 85.538905 iter 70 value 85.535400 iter 80 value 85.408304 iter 90 value 85.319906 final value 85.319710 converged Fitting Repeat 3 # weights: 507 initial value 105.065154 iter 10 value 93.920286 iter 20 value 93.860292 iter 30 value 93.668027 iter 40 value 92.279485 iter 50 value 87.217309 iter 60 value 85.437518 iter 70 value 84.873559 iter 80 value 84.863907 iter 90 value 84.862007 iter 100 value 83.703244 final value 83.703244 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 101.057722 iter 10 value 94.016979 iter 20 value 94.009062 final value 94.008964 converged Fitting Repeat 5 # weights: 507 initial value 99.831121 iter 10 value 94.016675 iter 20 value 93.685604 iter 30 value 84.098097 iter 40 value 81.846300 iter 50 value 81.341828 iter 60 value 81.248779 iter 70 value 80.721789 iter 80 value 80.197587 iter 90 value 79.573968 iter 100 value 79.471025 final value 79.471025 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 102.965379 final value 94.484211 converged Fitting Repeat 2 # weights: 103 initial value 101.608948 final value 94.484211 converged Fitting Repeat 3 # weights: 103 initial value 98.800422 final value 94.484211 converged Fitting Repeat 4 # weights: 103 initial value 97.426440 final value 94.484211 converged Fitting Repeat 5 # weights: 103 initial value 101.683810 final value 94.484211 converged Fitting Repeat 1 # weights: 305 initial value 104.554784 final value 94.484211 converged Fitting Repeat 2 # weights: 305 initial value 109.483668 final value 94.484211 converged Fitting Repeat 3 # weights: 305 initial value 98.928703 final value 94.484211 converged Fitting Repeat 4 # weights: 305 initial value 99.881847 final value 94.484211 converged Fitting Repeat 5 # weights: 305 initial value 95.025006 final value 94.484211 converged Fitting Repeat 1 # weights: 507 initial value 102.255059 final value 94.309797 converged Fitting Repeat 2 # weights: 507 initial value 104.763799 final value 94.484211 converged Fitting Repeat 3 # weights: 507 initial value 94.921000 iter 10 value 92.616232 iter 20 value 91.859599 final value 91.825813 converged Fitting Repeat 4 # weights: 507 initial value 116.306830 final value 94.484211 converged Fitting Repeat 5 # weights: 507 initial value 95.968774 final value 94.466823 converged Fitting Repeat 1 # weights: 103 initial value 99.794575 iter 10 value 94.393220 iter 20 value 91.383622 iter 30 value 91.261289 iter 40 value 89.264214 iter 50 value 84.598577 iter 60 value 84.157867 iter 70 value 83.533745 iter 80 value 82.923576 iter 90 value 82.558945 iter 100 value 82.554931 final value 82.554931 stopped after 100 iterations Fitting Repeat 2 # weights: 103 initial value 97.777289 iter 10 value 94.682989 iter 20 value 94.483270 iter 30 value 92.339884 iter 40 value 90.973349 iter 50 value 88.838997 iter 60 value 87.865963 iter 70 value 86.211287 iter 80 value 83.271030 iter 90 value 82.509092 iter 100 value 82.092287 final value 82.092287 stopped after 100 iterations Fitting Repeat 3 # weights: 103 initial value 97.649860 iter 10 value 94.519366 iter 20 value 92.010974 iter 30 value 89.638654 iter 40 value 89.418326 iter 50 value 85.139126 iter 60 value 84.815589 iter 70 value 84.345368 iter 80 value 83.308661 iter 90 value 83.300705 iter 100 value 82.643472 final value 82.643472 stopped after 100 iterations Fitting Repeat 4 # weights: 103 initial value 106.506297 iter 10 value 94.487973 iter 20 value 85.997200 iter 30 value 84.003699 iter 40 value 83.741668 iter 50 value 83.443571 iter 60 value 83.198717 iter 70 value 82.653587 iter 80 value 82.085459 iter 90 value 81.173894 iter 100 value 80.886721 final value 80.886721 stopped after 100 iterations Fitting Repeat 5 # weights: 103 initial value 97.498011 iter 10 value 94.671105 iter 20 value 94.488539 iter 30 value 94.389855 iter 40 value 90.306616 iter 50 value 83.890099 iter 60 value 83.329462 iter 70 value 82.991706 iter 80 value 82.567265 iter 90 value 81.514939 iter 100 value 81.193965 final value 81.193965 stopped after 100 iterations Fitting Repeat 1 # weights: 305 initial value 111.607563 iter 10 value 94.617166 iter 20 value 94.190471 iter 30 value 91.457351 iter 40 value 87.370726 iter 50 value 86.555017 iter 60 value 83.897573 iter 70 value 82.819913 iter 80 value 81.928448 iter 90 value 81.631658 iter 100 value 81.138681 final value 81.138681 stopped after 100 iterations Fitting Repeat 2 # weights: 305 initial value 103.730561 iter 10 value 94.511720 iter 20 value 93.784855 iter 30 value 88.102763 iter 40 value 84.041231 iter 50 value 82.458736 iter 60 value 82.098278 iter 70 value 81.836294 iter 80 value 81.386647 iter 90 value 80.378486 iter 100 value 79.819794 final value 79.819794 stopped after 100 iterations Fitting Repeat 3 # weights: 305 initial value 106.402981 iter 10 value 94.478790 iter 20 value 87.994124 iter 30 value 84.866987 iter 40 value 83.263189 iter 50 value 81.303931 iter 60 value 80.792968 iter 70 value 80.009319 iter 80 value 79.656261 iter 90 value 79.416585 iter 100 value 79.260746 final value 79.260746 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 102.679528 iter 10 value 94.117679 iter 20 value 86.828295 iter 30 value 85.416068 iter 40 value 84.316742 iter 50 value 82.991085 iter 60 value 82.325427 iter 70 value 81.544275 iter 80 value 81.094192 iter 90 value 80.972066 iter 100 value 80.960979 final value 80.960979 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 110.268351 iter 10 value 94.355814 iter 20 value 87.330370 iter 30 value 84.751098 iter 40 value 84.004660 iter 50 value 81.716990 iter 60 value 80.235647 iter 70 value 79.774737 iter 80 value 79.694147 iter 90 value 79.560243 iter 100 value 79.276964 final value 79.276964 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 121.188249 iter 10 value 94.426956 iter 20 value 87.976879 iter 30 value 85.641081 iter 40 value 82.863576 iter 50 value 81.381177 iter 60 value 79.861507 iter 70 value 79.326535 iter 80 value 79.111807 iter 90 value 78.988984 iter 100 value 78.912825 final value 78.912825 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 119.058898 iter 10 value 95.200084 iter 20 value 86.414899 iter 30 value 84.503598 iter 40 value 82.456794 iter 50 value 80.959057 iter 60 value 80.103591 iter 70 value 79.338769 iter 80 value 79.048307 iter 90 value 78.946207 iter 100 value 78.921931 final value 78.921931 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 110.368281 iter 10 value 94.489984 iter 20 value 94.336209 iter 30 value 84.511968 iter 40 value 82.415345 iter 50 value 80.556481 iter 60 value 80.318254 iter 70 value 79.629685 iter 80 value 79.501657 iter 90 value 79.349108 iter 100 value 79.245173 final value 79.245173 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 125.766771 iter 10 value 95.803545 iter 20 value 86.994505 iter 30 value 85.634957 iter 40 value 82.324177 iter 50 value 81.040076 iter 60 value 80.531619 iter 70 value 80.293890 iter 80 value 80.182577 iter 90 value 79.995550 iter 100 value 79.858542 final value 79.858542 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 127.527437 iter 10 value 93.811204 iter 20 value 86.116286 iter 30 value 83.805045 iter 40 value 83.039007 iter 50 value 82.094908 iter 60 value 81.661172 iter 70 value 81.044739 iter 80 value 80.535442 iter 90 value 80.231030 iter 100 value 79.921030 final value 79.921030 stopped after 100 iterations Fitting Repeat 1 # weights: 103 initial value 104.240103 final value 94.485772 converged Fitting Repeat 2 # weights: 103 initial value 115.736108 final value 94.485829 converged Fitting Repeat 3 # weights: 103 initial value 105.619420 final value 94.485749 converged Fitting Repeat 4 # weights: 103 initial value 98.391107 final value 94.485866 converged Fitting Repeat 5 # weights: 103 initial value 97.750491 final value 94.485853 converged Fitting Repeat 1 # weights: 305 initial value 128.209025 iter 10 value 94.489093 iter 20 value 94.484818 iter 30 value 92.153313 iter 40 value 91.924232 iter 50 value 91.865866 iter 60 value 91.865140 final value 91.865134 converged Fitting Repeat 2 # weights: 305 initial value 98.171354 iter 10 value 94.433994 iter 20 value 94.431689 iter 30 value 94.428829 final value 94.426618 converged Fitting Repeat 3 # weights: 305 initial value 95.239954 iter 10 value 89.339624 iter 20 value 81.181218 iter 30 value 81.054051 iter 40 value 81.053580 iter 50 value 80.960718 iter 60 value 80.870927 iter 70 value 80.850501 iter 80 value 80.850390 iter 90 value 80.849051 iter 100 value 80.847013 final value 80.847013 stopped after 100 iterations Fitting Repeat 4 # weights: 305 initial value 110.066955 iter 10 value 94.489830 iter 20 value 93.738523 iter 30 value 84.431798 iter 40 value 84.399388 iter 50 value 84.398363 iter 60 value 83.396000 iter 70 value 83.120690 iter 80 value 82.405304 iter 90 value 81.622880 iter 100 value 81.085106 final value 81.085106 stopped after 100 iterations Fitting Repeat 5 # weights: 305 initial value 95.464262 iter 10 value 94.471597 iter 20 value 94.077710 iter 30 value 85.527317 iter 40 value 81.063258 iter 50 value 81.060569 iter 60 value 81.052619 iter 70 value 81.019346 iter 80 value 81.018468 iter 90 value 81.017561 iter 100 value 80.845402 final value 80.845402 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 113.368678 iter 10 value 94.436814 iter 20 value 94.429277 iter 30 value 84.817110 iter 40 value 82.519405 iter 50 value 82.195345 iter 60 value 81.534986 iter 70 value 78.395810 iter 80 value 78.168615 iter 90 value 78.095933 iter 100 value 78.092836 final value 78.092836 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 105.270132 iter 10 value 94.483465 iter 20 value 94.451350 iter 30 value 94.329018 iter 40 value 94.315346 iter 50 value 91.123107 iter 60 value 91.114972 final value 91.114140 converged Fitting Repeat 3 # weights: 507 initial value 100.399168 iter 10 value 94.486432 iter 20 value 85.447739 iter 30 value 84.198303 iter 40 value 84.194230 iter 50 value 84.193992 iter 60 value 84.193910 iter 70 value 84.193753 iter 80 value 83.643409 iter 90 value 80.663289 iter 100 value 79.019600 final value 79.019600 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 97.468642 iter 10 value 94.343074 iter 20 value 93.907862 iter 30 value 93.903070 iter 40 value 93.832679 iter 50 value 89.929842 final value 89.682601 converged Fitting Repeat 5 # weights: 507 initial value 101.975099 iter 10 value 92.160827 iter 20 value 91.110782 iter 30 value 91.106585 iter 40 value 91.104221 iter 50 value 91.101459 iter 60 value 90.728580 iter 70 value 90.675979 iter 80 value 90.658048 iter 90 value 90.579602 iter 100 value 90.466561 final value 90.466561 stopped after 100 iterations Fitting Repeat 1 # weights: 507 initial value 127.847025 iter 10 value 118.091374 iter 20 value 117.697296 iter 30 value 109.283254 iter 40 value 104.891696 iter 50 value 103.563212 iter 60 value 103.001296 iter 70 value 102.743700 iter 80 value 102.605599 iter 90 value 102.041565 iter 100 value 101.663928 final value 101.663928 stopped after 100 iterations Fitting Repeat 2 # weights: 507 initial value 140.488254 iter 10 value 117.861463 iter 20 value 106.729052 iter 30 value 105.906109 iter 40 value 105.604448 iter 50 value 105.372208 iter 60 value 104.584226 iter 70 value 102.893854 iter 80 value 102.242981 iter 90 value 101.462877 iter 100 value 101.285708 final value 101.285708 stopped after 100 iterations Fitting Repeat 3 # weights: 507 initial value 147.865938 iter 10 value 117.925069 iter 20 value 108.849425 iter 30 value 105.401242 iter 40 value 104.725859 iter 50 value 103.143790 iter 60 value 101.849999 iter 70 value 101.482460 iter 80 value 101.185323 iter 90 value 100.837854 iter 100 value 100.707760 final value 100.707760 stopped after 100 iterations Fitting Repeat 4 # weights: 507 initial value 130.570828 iter 10 value 118.412201 iter 20 value 117.653256 iter 30 value 114.602895 iter 40 value 109.454815 iter 50 value 107.864515 iter 60 value 107.213245 iter 70 value 106.698229 iter 80 value 104.765126 iter 90 value 103.472572 iter 100 value 102.815060 final value 102.815060 stopped after 100 iterations Fitting Repeat 5 # weights: 507 initial value 128.945900 iter 10 value 118.018309 iter 20 value 113.043938 iter 30 value 108.651527 iter 40 value 107.137439 iter 50 value 105.805314 iter 60 value 105.207870 iter 70 value 104.923207 iter 80 value 104.230648 iter 90 value 102.624869 iter 100 value 102.084144 final value 102.084144 stopped after 100 iterations svmRadial ranger Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls < cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases Setting levels: control = Positive, case = Negative Setting direction: controls > cases RUNIT TEST PROTOCOL -- Thu Mar 28 04:11:17 2024 *********************************************** Number of test functions: 7 Number of errors: 0 Number of failures: 0 1 Test Suite : HPiP RUnit Tests - 7 test functions, 0 errors, 0 failures Number of test functions: 7 Number of errors: 0 Number of failures: 0 Warning messages: 1: `repeats` has no meaning for this resampling method. 2: executing %dopar% sequentially: no parallel backend registered > > > > > proc.time() user system elapsed 71.380 2.193 78.643
HPiP.Rcheck/HPiP-Ex.timings
name | user | system | elapsed | |
FSmethod | 50.351 | 1.884 | 56.212 | |
FreqInteractors | 0.468 | 0.019 | 0.512 | |
calculateAAC | 0.072 | 0.015 | 0.092 | |
calculateAutocor | 0.828 | 0.118 | 1.029 | |
calculateCTDC | 0.141 | 0.010 | 0.160 | |
calculateCTDD | 1.188 | 0.038 | 1.299 | |
calculateCTDT | 0.423 | 0.018 | 0.473 | |
calculateCTriad | 0.750 | 0.042 | 0.864 | |
calculateDC | 0.233 | 0.028 | 0.275 | |
calculateF | 0.619 | 0.017 | 0.674 | |
calculateKSAAP | 0.266 | 0.022 | 0.306 | |
calculateQD_Sm | 3.415 | 0.176 | 3.820 | |
calculateTC | 4.339 | 0.455 | 5.152 | |
calculateTC_Sm | 0.510 | 0.035 | 0.578 | |
corr_plot | 50.555 | 1.919 | 56.184 | |
enrichfindP | 0.875 | 0.098 | 15.652 | |
enrichfind_hp | 0.126 | 0.029 | 1.165 | |
enrichplot | 0.743 | 0.013 | 0.768 | |
filter_missing_values | 0.002 | 0.001 | 0.002 | |
getFASTA | 0.119 | 0.015 | 3.634 | |
getHPI | 0.001 | 0.001 | 0.002 | |
get_negativePPI | 0.003 | 0.001 | 0.003 | |
get_positivePPI | 0.000 | 0.001 | 0.001 | |
impute_missing_data | 0.002 | 0.001 | 0.005 | |
plotPPI | 0.135 | 0.004 | 0.146 | |
pred_ensembel | 23.332 | 0.483 | 20.109 | |
var_imp | 51.830 | 1.996 | 59.498 | |