Back to Multiple platform build/check report for BioC 3.16
ABCDE[F]GHIJKLMNOPQRSTUVWXYZ

This page was generated on 2023-01-31 11:09:23 -0500 (Tue, 31 Jan 2023).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.5 LTS)x86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4511
palomino4Windows Server 2022 Datacenterx644.2.2 (2022-10-31 ucrt) -- "Innocent and Trusting" 4289
lconwaymacOS 12.5.1 Montereyx86_644.2.2 (2022-10-31) -- "Innocent and Trusting" 4318
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for FEAST on lconway


To the developers/maintainers of the FEAST package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/FEAST.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 669/2183HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
FEAST 1.6.0  (landing page)
Kenong Su
Snapshot Date: 2023-01-30 14:00:05 -0500 (Mon, 30 Jan 2023)
git_url: https://git.bioconductor.org/packages/FEAST
git_branch: RELEASE_3_16
git_last_commit: 7d99b9d
git_last_commit_date: 2022-11-01 11:24:45 -0500 (Tue, 01 Nov 2022)
nebbiolo2Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.5.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: FEAST
Version: 1.6.0
Command: /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL FEAST
StartedAt: 2023-01-30 15:21:48 -0500 (Mon, 30 Jan 2023)
EndedAt: 2023-01-30 15:22:24 -0500 (Mon, 30 Jan 2023)
EllapsedTime: 35.9 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /Library/Frameworks/R.framework/Resources/bin/R CMD INSTALL FEAST
###
##############################################################################
##############################################################################


* installing to library ‘/Library/Frameworks/R.framework/Versions/4.2/Resources/library’
* installing *source* package ‘FEAST’ ...
** using staged installation
** libs
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG   -I/usr/local/include   -fPIC  -Wall -g -O2  -c cal_3_metrics.c -o cal_3_metrics.o
cal_3_metrics.c:42:22: warning: variable 'ni_2' set but not used [-Wunused-but-set-variable]
    double *nc, *nr, ni_2, n_j2, nt, nij_2;
                     ^
cal_3_metrics.c:42:28: warning: variable 'n_j2' set but not used [-Wunused-but-set-variable]
    double *nc, *nr, ni_2, n_j2, nt, nij_2;
                           ^
cal_3_metrics.c:42:34: warning: variable 'nt' set but not used [-Wunused-but-set-variable]
    double *nc, *nr, ni_2, n_j2, nt, nij_2;
                                 ^
cal_3_metrics.c:42:38: warning: variable 'nij_2' set but not used [-Wunused-but-set-variable]
    double *nc, *nr, ni_2, n_j2, nt, nij_2;
                                     ^
4 warnings generated.
clang -mmacosx-version-min=10.13 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o FEAST.so cal_3_metrics.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Library/Frameworks/R.framework/Versions/4.2/Resources/library/00LOCK-FEAST/00new/FEAST/libs
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (FEAST)