Back to Multiple platform build/check report for BioC 3.19:   simplified   long
ABCD[E]FGHIJKLMNOPQRSTUVWXYZ

This page was generated on 2024-05-17 11:36:53 -0400 (Fri, 17 May 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 22.04.3 LTS)x86_644.4.0 (2024-04-24) -- "Puppy Cup" 4751
palomino3Windows Server 2022 Datacenterx644.4.0 (2024-04-24 ucrt) -- "Puppy Cup" 4485
lconwaymacOS 12.7.1 Montereyx86_644.4.0 (2024-04-24) -- "Puppy Cup" 4515
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 692/2300HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
ExperimentSubset 1.14.0  (landing page)
Irzam Sarfraz
Snapshot Date: 2024-05-16 14:00:15 -0400 (Thu, 16 May 2024)
git_url: https://git.bioconductor.org/packages/ExperimentSubset
git_branch: RELEASE_3_19
git_last_commit: 1d4782f
git_last_commit_date: 2024-04-30 11:28:17 -0400 (Tue, 30 Apr 2024)
nebbiolo1Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.7.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published
kjohnson3macOS 13.6.5 Ventura / arm64see weekly results here

BUILD BIN results for ExperimentSubset on palomino3


To the developers/maintainers of the ExperimentSubset package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ExperimentSubset.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: ExperimentSubset
Version: 1.14.0
Command: rm -rf ExperimentSubset.buildbin-libdir && mkdir ExperimentSubset.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=ExperimentSubset.buildbin-libdir ExperimentSubset_1.14.0.tar.gz
StartedAt: 2024-05-17 08:41:41 -0400 (Fri, 17 May 2024)
EndedAt: 2024-05-17 08:42:35 -0400 (Fri, 17 May 2024)
EllapsedTime: 54.6 seconds
RetCode: 0
Status:   OK  
PackageFile: ExperimentSubset_1.14.0.zip
PackageFileSize: 707.1 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf ExperimentSubset.buildbin-libdir && mkdir ExperimentSubset.buildbin-libdir && F:\biocbuild\bbs-3.19-bioc\R\bin\R.exe CMD INSTALL --build --library=ExperimentSubset.buildbin-libdir ExperimentSubset_1.14.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'ExperimentSubset' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetRangedSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSingleCellExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetTreeSummarizedExperiment", slots in prototype and not in class: listData, elementType
Warning in makePrototypeFromClassDef(properties, ClassDef, immediate, where) :
  in constructing the prototype for class "SubsetSpatialExperiment", slots in prototype and not in class: listData, elementType
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'ExperimentSubset' as ExperimentSubset_1.14.0.zip
* DONE (ExperimentSubset)