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BioC 3.6: INSTALL report for mgsa on malbec1

This page was generated on 2017-08-16 13:19:13 -0400 (Wed, 16 Aug 2017).

Package 825/1410HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
mgsa 1.25.1
Sebastian Bauer
Snapshot Date: 2017-08-15 17:18:21 -0400 (Tue, 15 Aug 2017)
URL: https://hedgehog.fhcrc.org/bioconductor/trunk/madman/Rpacks/mgsa
Last Changed Rev: 129635 / Revision: 131943
Last Changed Date: 2017-05-16 16:11:49 -0400 (Tue, 16 May 2017)
malbec1 Linux (Ubuntu 16.04.1 LTS) / x86_64 [ OK ] OK  OK UNNEEDED, same version exists in internal repository
tokay1 Windows Server 2012 R2 Standard / x64  NotNeeded  OK  OK  OK UNNEEDED, same version exists in internal repository
veracruz1 OS X 10.11.6 El Capitan / x86_64  OK  OK  OK  OK UNNEEDED, same version exists in internal repository

Summary

Package: mgsa
Version: 1.25.1
Command: /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD INSTALL mgsa
StartedAt: 2017-08-15 18:03:29 -0400 (Tue, 15 Aug 2017)
EndedAt: 2017-08-15 18:03:33 -0400 (Tue, 15 Aug 2017)
EllapsedTime: 4.9 seconds
RetCode: 0
Status:  OK 

Command output

##############################################################################
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###
### Running command:
###
###   /home/biocbuild/bbs-3.6-bioc/R/bin/R CMD INSTALL mgsa
###
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* installing to library ‘/home/biocbuild/bbs-3.6-bioc/R/library’
* installing *source* package ‘mgsa’ ...
configure: creating ./config.status
config.status: creating src/Makevars
** libs
gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG   -I/usr/local/include  -I. -fopenmp -fpic  -g -O2  -Wall -c mgsa-core.c -o mgsa-core.o
mgsa-core.c:796:13: warning: ‘print_context’ defined but not used [-Wunused-function]
 static void print_context(struct context *cn)
             ^
gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG   -I/usr/local/include  -I. -fopenmp -fpic  -g -O2  -Wall -c mgsa.c -o mgsa.o
gcc -I/home/biocbuild/bbs-3.6-bioc/R/include -DNDEBUG   -I/usr/local/include  -I. -fopenmp -fpic  -g -O2  -Wall -c mt.c -o mt.o
gcc -shared -L/home/biocbuild/bbs-3.6-bioc/R/lib -L/usr/local/lib -o mgsa.so mgsa-core.o mgsa.o mt.o -fopenmp -L/home/biocbuild/bbs-3.6-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.6-bioc/R/library/mgsa/libs
** R
** data
** inst
** preparing package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded
* DONE (mgsa)