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This page was generated on 2024-04-17 11:37:14 -0400 (Wed, 17 Apr 2024).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 22.04.3 LTS)x86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4676
palomino4Windows Server 2022 Datacenterx644.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" 4414
merida1macOS 12.7.1 Montereyx86_644.3.3 (2024-02-29) -- "Angel Food Cake" 4437
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

Package 1796/2266HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RProtoBufLib 2.14.1  (landing page)
Mike Jiang
Snapshot Date: 2024-04-15 14:05:01 -0400 (Mon, 15 Apr 2024)
git_url: https://git.bioconductor.org/packages/RProtoBufLib
git_branch: RELEASE_3_18
git_last_commit: cb81f56
git_last_commit_date: 2024-03-16 19:51:45 -0400 (Sat, 16 Mar 2024)
nebbiolo2Linux (Ubuntu 22.04.3 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 12.7.1 Monterey / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
kjohnson1macOS 13.6.1 Ventura / arm64see weekly results here

BUILD BIN results for RProtoBufLib on palomino4


To the developers/maintainers of the RProtoBufLib package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RProtoBufLib.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results


Summary

Package: RProtoBufLib
Version: 2.14.1
Command: rm -rf RProtoBufLib.buildbin-libdir && mkdir RProtoBufLib.buildbin-libdir && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD INSTALL --build --library=RProtoBufLib.buildbin-libdir RProtoBufLib_2.14.1.tar.gz
StartedAt: 2024-04-16 07:35:43 -0400 (Tue, 16 Apr 2024)
EndedAt: 2024-04-16 07:36:19 -0400 (Tue, 16 Apr 2024)
EllapsedTime: 35.8 seconds
RetCode: 0
Status:   OK  
PackageFile: RProtoBufLib_2.14.1.zip
PackageFileSize: 2.299 MiB

Command output

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###
### Running command:
###
###   rm -rf RProtoBufLib.buildbin-libdir && mkdir RProtoBufLib.buildbin-libdir && F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD INSTALL --build --library=RProtoBufLib.buildbin-libdir RProtoBufLib_2.14.1.tar.gz
###
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* installing *source* package 'RProtoBufLib' ...
** using staged installation
** libs
Warning: this package has a non-empty 'configure.win' file,
so building only the main architecture

using C++ compiler: 'G__~1.EXE (GCC) 12.3.0'
using C++11
"F:/biocbuild/bbs-3.18-bioc/R/bin/x64/Rscript.exe" "../tools/downloadlibs.R" 3.8.0
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.8.0/include    -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c GatingSet_pb_lib/GatingSet.pb.cc -o GatingSet_pb_lib/GatingSet.pb.o
mkdir -p "F:/biocbuild/bbs-3.18-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
cp -r ../windows/protobuf-3.8.0/include/google "F:/biocbuild/bbs-3.18-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/include"
mkdir -p "F:/biocbuild/bbs-3.18-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/x64"
cp  ../windows/protobuf-3.8.0/lib/x64-ucrt/libprotobuf.a "F:/biocbuild/bbs-3.18-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/x64/libprotobuf.a"
cp GatingSet_pb_lib/GatingSet.pb.o "F:/biocbuild/bbs-3.18-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/lib/x64/GatingSet.pb.o"
g++  -std=gnu++11 -I"F:/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I../inst/include/ -I../windows/protobuf-3.8.0/include    -I"C:/rtools43/x86_64-w64-mingw32.static.posix/include"     -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c dummy.cpp -o dummy.o
g++ -shared -s -static-libgcc -o RProtoBufLib.dll tmp.def dummy.o -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib/x64 -LC:/rtools43/x86_64-w64-mingw32.static.posix/lib -LF:/biocbuild/bbs-3.18-bioc/R/bin/x64 -lR
installing to F:/biocbuild/bbs-3.18-bioc/meat/RProtoBufLib.buildbin-libdir/00LOCK-RProtoBufLib/00new/RProtoBufLib/libs/x64
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'RProtoBufLib' as RProtoBufLib_2.14.1.zip
* DONE (RProtoBufLib)