Multiple platform build/check report for BioC 3.18 - INSTALL results for Clonality on palomino4

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This page was generated on 2024-04-17 11:36:38 -0400 (Wed, 17 Apr 2024).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo2	Linux (Ubuntu 22.04.3 LTS)	x86_64	4.3.3 (2024-02-29) -- "Angel Food Cake"	4676
palomino4	Windows Server 2022 Datacenter	x64	4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake"	4414
merida1	macOS 12.7.1 Monterey	x86_64	4.3.3 (2024-02-29) -- "Angel Food Cake"	4437
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

~~Clonality 1.50.0~~ (landing page)
Irina Ostrovnaya

Snapshot Date: 2024-04-15 14:05:01 -0400 (Mon, 15 Apr 2024)

git_url: https://git.bioconductor.org/packages/Clonality

git_branch: RELEASE_3_18

git_last_commit: 19b8093

git_last_commit_date: 2023-10-24 09:45:29 -0400 (Tue, 24 Oct 2023)

nebbiolo2

Linux (Ubuntu 22.04.3 LTS) / x86_64

ERROR

skipped

palomino4

Windows Server 2022 Datacenter / x64

ERROR

skipped

merida1

macOS 12.7.1 Monterey / x86_64

ERROR

skipped

kjohnson1

macOS 13.6.1 Ventura / arm64

see weekly results here

INSTALL results for Clonality on palomino4

To the developers/maintainers of the Clonality package:
- Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Clonality.git to reflect on this report. See Troubleshooting Build Report for more information.
- Use the following Renviron settings to reproduce errors and warnings.
- If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information.

raw results

Summary

Package: Clonality

Version: 1.50.0

Command: F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD INSTALL Clonality

StartedAt: 2024-04-15 15:36:03 -0400 (Mon, 15 Apr 2024)

EndedAt: 2024-04-15 15:36:25 -0400 (Mon, 15 Apr 2024)

EllapsedTime: 21.9 seconds

RetCode: 1

Status: ERROR

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.18-bioc\R\bin\R.exe CMD INSTALL Clonality
###
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* installing to library 'F:/biocbuild/bbs-3.18-bioc/R/library'
* installing *binary* package 'Clonality' ...
cp: unknown option -- )
Try '/usr/bin/cp --help' for more information.
ERROR: installing binary package failed
* removing 'F:/biocbuild/bbs-3.18-bioc/R/library/Clonality'