Thomas Girke
| Snapshot Date: 2024-04-10 14:05:05 -0400 (Wed, 10 Apr 2024) |
| git_url: https://git.bioconductor.org/packages/ChemmineR |
| git_branch: RELEASE_3_18 |
| git_last_commit: 19385e6 |
| git_last_commit_date: 2023-10-24 09:40:48 -0400 (Tue, 24 Oct 2023) |
| Back to Multiple platform build/check report for BioC 3.18: simplified long |
|
This page was generated on 2024-04-12 11:35:43 -0400 (Fri, 12 Apr 2024).
| Hostname | OS | Arch (*) | R version | Installed pkgs |
|---|---|---|---|---|
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4675 |
| palomino4 | Windows Server 2022 Datacenter | x64 | 4.3.3 (2024-02-29 ucrt) -- "Angel Food Cake" | 4413 |
| merida1 | macOS 12.7.1 Monterey | x86_64 | 4.3.3 (2024-02-29) -- "Angel Food Cake" | 4436 |
| Click on any hostname to see more info about the system (e.g. compilers) (*) as reported by 'uname -p', except on Windows and Mac OS X | ||||
| Package 324/2266 | Hostname | OS / Arch | INSTALL | BUILD | CHECK | BUILD BIN | ||||||||
| ChemmineR 3.54.0 (landing page) Thomas Girke
| nebbiolo2 | Linux (Ubuntu 22.04.3 LTS) / x86_64 | OK | OK | WARNINGS | | ||||||||
| palomino4 | Windows Server 2022 Datacenter / x64 | OK | OK | WARNINGS | OK | | ||||||||
| merida1 | macOS 12.7.1 Monterey / x86_64 | OK | OK | WARNINGS | OK | | ||||||||
| kjohnson1 | macOS 13.6.1 Ventura / arm64 | see weekly results here | ||||||||||||
|
To the developers/maintainers of the ChemmineR package: - Allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/ChemmineR.git to reflect on this report. See Troubleshooting Build Report for more information. - Use the following Renviron settings to reproduce errors and warnings. - If 'R CMD check' started to fail recently on the Linux builder(s) over a missing dependency, add the missing dependency to 'Suggests:' in your DESCRIPTION file. See Renviron.bioc for more information. |
| Package: ChemmineR |
| Version: 3.54.0 |
| Command: /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:ChemmineR.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings ChemmineR_3.54.0.tar.gz |
| StartedAt: 2024-04-10 21:06:34 -0400 (Wed, 10 Apr 2024) |
| EndedAt: 2024-04-10 21:08:44 -0400 (Wed, 10 Apr 2024) |
| EllapsedTime: 130.0 seconds |
| RetCode: 0 |
| Status: WARNINGS |
| CheckDir: ChemmineR.Rcheck |
| Warnings: 2 |
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### Running command:
###
### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD check --install=check:ChemmineR.install-out.txt --library=/home/biocbuild/bbs-3.18-bioc/R/site-library --timings ChemmineR_3.54.0.tar.gz
###
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* using log directory ‘/home/biocbuild/bbs-3.18-bioc/meat/ChemmineR.Rcheck’
* using R version 4.3.3 (2024-02-29)
* using platform: x86_64-pc-linux-gnu (64-bit)
* R was compiled by
gcc (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
GNU Fortran (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0
* running under: Ubuntu 22.04.4 LTS
* using session charset: UTF-8
* checking for file ‘ChemmineR/DESCRIPTION’ ... OK
* checking extension type ... Package
* this is package ‘ChemmineR’ version ‘3.54.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ChemmineR’ can be installed ... WARNING
Found the following significant warnings:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:95:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 4 bytes from a string of length 100001 [-Wstringop-truncation]
See ‘/home/biocbuild/bbs-3.18-bioc/meat/ChemmineR.Rcheck/00install.out’ for details.
* used C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
* checking installed package size ... OK
* checking package directory ... OK
* checking ‘build’ directory ... OK
* checking DESCRIPTION meta-information ... NOTE
Package listed in more than one of Depends, Imports, Suggests, Enhances:
‘png’
A package should be listed in only one of these fields.
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking R files for non-ASCII characters ... OK
* checking R files for syntax errors ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking loading without being on the library search path ... OK
* checking startup messages can be suppressed ... OK
* checking dependencies in R code ... NOTE
'library' or 'require' calls in package code:
‘ChemmineDrugs’ ‘ChemmineOB’ ‘RPostgreSQL’ ‘RSQLite’ ‘fmcsR’ ‘png’
‘snow’
Please use :: or requireNamespace() instead.
See section 'Suggested packages' in the 'Writing R Extensions' manual.
Namespace in Imports field not imported from: ‘BiocGenerics’
All declared Imports should be used.
* checking S3 generic/method consistency ... OK
* checking replacement functions ... OK
* checking foreign function calls ... OK
* checking R code for possible problems ... NOTE
Found the following possibly unsafe calls:
File ‘ChemmineR/R/sim.R’:
unlockBinding(".progress_bar_int_cnt", environment(.progress_bar))
.data.frame.to.str: no visible global function definition for
‘write.table’
.data.frame.to.str: no visible binding for global variable ‘string’
.parseV3000: no visible binding for global variable ‘AW’
.rings: no visible global function definition for ‘combn’
DUD: no visible global function definition for ‘download.file’
DUD: no visible global function definition for ‘untar’
applyOptions: no visible global function definition for ‘convertFormat’
browseJob: no visible global function definition for ‘browseURL’
canonicalNumbering: no visible global function definition for
‘canonicalNumbering_OB’
canonicalNumberingOB: no visible global function definition for
‘canonicalNumbering_OB’
cluster.visualize: no visible global function definition for ‘rainbow’
cluster.visualize: no visible global function definition for ‘pdf’
cluster.visualize: no visible global function definition for
‘postscript’
cluster.visualize: no visible global function definition for ‘dev.off’
desc2fp: no visible global function definition for ‘data’
draw_sdf: no visible global function definition for ‘rgb’
draw_sdf: no visible global function definition for ‘fmcs’
exactMassOB: no visible global function definition for ‘exactMass_OB’
fingerprintOB: no visible global function definition for
‘fingerprint_OB’
getCompoundFeatures : <anonymous>: no visible global function
definition for ‘write.table’
getCompounds: no visible global function definition for ‘str’
getDbConn: no visible global function definition for ‘error’
handle_segs: no visible binding for global variable ‘C1’
handle_segs: no visible binding for global variable ‘C2’
handle_segs: no visible binding for global variable ‘C1.1’
handle_segs: no visible binding for global variable ‘C2.1’
handle_text: no visible binding for global variable ‘C1’
handle_text: no visible binding for global variable ‘C2’
listCMTools: no visible global function definition for ‘read.table’
parBatchByIndex: no visible global function definition for
‘clusterExport’
parBatchByIndex: no visible global function definition for
‘clusterApplyLB’
postgresqlWriteTable: no visible global function definition for
‘postgresqlTableRef’
postgresqlWriteTable: no visible global function definition for
‘postgresqlQuoteId’
postgresqlWriteTable: no visible global function definition for
‘postgresqlpqExec’
postgresqlWriteTable: no visible global function definition for
‘postgresqlCopyInDataframe’
postgresqlWriteTable: no visible global function definition for
‘postgresqlgetResult’
propOB: no visible global function definition for ‘prop_OB’
read.AP: no visible global function definition for ‘read.delim’
sdf2OBMol: no visible global function definition for ‘forEachMol’
sdf2image: no visible global function definition for ‘convertToImage’
sdf2smiles: no visible global function definition for ‘convertFormat’
sdf2smilesOB: no visible global function definition for ‘convertFormat’
sdfStream: no visible global function definition for ‘write.table’
setPriorities: no visible global function definition for
‘clusterExport’
smartsSearchOB: no visible global function definition for
‘smartsSearch_OB’
smile2sdfFile: no visible global function definition for
‘convertFormatFile’
smiles2sdf: no visible global function definition for ‘convertFormat’
smiles2sdfOB: no visible global function definition for ‘convertFormat’
write.SMI: no visible global function definition for ‘write.table’
Undefined global functions or variables:
AW C1 C1.1 C2 C2.1 browseURL canonicalNumbering_OB clusterApplyLB
clusterExport combn convertFormat convertFormatFile convertToImage
data dev.off download.file error exactMass_OB fingerprint_OB fmcs
forEachMol pdf postgresqlCopyInDataframe postgresqlQuoteId
postgresqlTableRef postgresqlgetResult postgresqlpqExec postscript
prop_OB rainbow read.delim read.table rgb smartsSearch_OB str string
untar write.table
Consider adding
importFrom("grDevices", "dev.off", "pdf", "postscript", "rainbow",
"rgb")
importFrom("utils", "browseURL", "combn", "data", "download.file",
"read.delim", "read.table", "str", "untar", "write.table")
to your NAMESPACE file.
* checking Rd files ... NOTE
checkRd: (-1) cmp.duplicated.Rd:29: Escaped LaTeX specials: \$
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... WARNING
Undocumented code objects:
‘sdfid<-’
Undocumented S4 methods:
generic '$' and siglist '_p_Descriptors'
generic '[' and siglist 'ExternalReferenceSwig'
generic '[<-' and siglist 'ExternalReferenceSwig'
generic 'coerce' and siglist 'ExternalReferenceSwig,character'
generic 'length' and siglist 'SWIGArray'
generic 'sdfid<-' and siglist 'SDFset'
All user-level objects in a package (including S4 classes and methods)
should have documentation entries.
See chapter ‘Writing R documentation files’ in the ‘Writing R
Extensions’ manual.
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking line endings in C/C++/Fortran sources/headers ... OK
* checking line endings in Makefiles ... OK
* checking compilation flags in Makevars ... OK
* checking for GNU extensions in Makefiles ... OK
* checking for portable use of $(BLAS_LIBS) and $(LAPACK_LIBS) ... OK
* checking use of PKG_*FLAGS in Makefiles ... OK
* checking compiled code ... NOTE
Note: information on .o files is not available
File ‘/home/biocbuild/bbs-3.18-bioc/R/site-library/ChemmineR/libs/ChemmineR.so’:
Found ‘_ZSt4cerr’, possibly from ‘std::cerr’ (C++)
Found ‘_ZSt4cout’, possibly from ‘std::cout’ (C++)
Compiled code should not call entry points which might terminate R nor
write to stdout/stderr instead of to the console, nor use Fortran I/O
nor system RNGs nor [v]sprintf. The detected symbols are linked into
the code but might come from libraries and not actually be called.
See ‘Writing portable packages’ in the ‘Writing R Extensions’ manual.
* checking files in ‘vignettes’ ... OK
* checking examples ... OK
* checking for unstated dependencies in ‘tests’ ... OK
* checking tests ...
Running ‘runTests.R’
OK
* checking for unstated dependencies in vignettes ... OK
* checking package vignettes in ‘inst/doc’ ... OK
* checking running R code from vignettes ...
‘ChemmineR.Rmd’ using ‘UTF-8’... OK
OK
* checking re-building of vignette outputs ... OK
* checking PDF version of manual ... OK
* DONE
Status: 2 WARNINGs, 5 NOTEs
See
‘/home/biocbuild/bbs-3.18-bioc/meat/ChemmineR.Rcheck/00check.log’
for details.
ChemmineR.Rcheck/00install.out
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### Running command:
###
### /home/biocbuild/bbs-3.18-bioc/R/bin/R CMD INSTALL ChemmineR
###
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##############################################################################
* installing to library ‘/home/biocbuild/bbs-3.18-bioc/R/site-library’
* installing *source* package ‘ChemmineR’ ...
** using staged installation
** libs
using C++ compiler: ‘g++ (Ubuntu 11.4.0-1ubuntu1~22.04) 11.4.0’
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c DisjointSets.cpp -o DisjointSets.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c cluster.cc -o cluster.o
cluster.cc: In function ‘int nbr_intersect(std::vector<int>&, std::vector<int>&)’:
cluster.cc:118:18: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
118 | while (i < nbrs1.size() and j < nbrs2.size()) {
| ~~^~~~~~~~~~~~~~
cluster.cc:118:39: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
118 | while (i < nbrs1.size() and j < nbrs2.size()) {
| ~~^~~~~~~~~~~~~~
cluster.cc: In function ‘int contains(int, std::vector<int>&)’:
cluster.cc:131:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
131 | for(int i=0; i < list.size(); i++)
| ~~^~~~~~~~~~~~~
cluster.cc: In function ‘DisjointSets cluster(int, int, int, int)’:
cluster.cc:267:35: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
267 | for (int j = 0; j < nbr_list[i].size(); j ++) {
| ~~^~~~~~~~~~~~~~~~~~~~
cluster.cc: In function ‘void loadNNMatrix(int, int, int, SEXP)’:
cluster.cc:284:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
284 | for(unsigned i=0; i<N; i++) //rows
| ~^~
cluster.cc:298:32: warning: comparison of integer expressions of different signedness: ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
298 | if(nbrs.size() < minNbrs) // will end up a singleton
| ~~~~~~~~~~~~^~~~~~~~~
cluster.cc: In function ‘void loadNNList(int, int, SEXP)’:
cluster.cc:314:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
314 | for(unsigned i=0; i<N; i++) //rows
| ~^~
cluster.cc:332:32: warning: comparison of integer expressions of different signedness: ‘std::vector<int>::size_type’ {aka ‘long unsigned int’} and ‘int’ [-Wsign-compare]
332 | if(nbrs.size() < minNbrs) // will end up a singleton
| ~~~~~~~~~~~~^~~~~~~~~
cluster.cc: In function ‘SEXPREC* jarvis_patrick(SEXP, SEXP, SEXP, SEXP, SEXP)’:
cluster.cc:390:28: warning: comparison of integer expressions of different signedness: ‘unsigned int’ and ‘int’ [-Wsign-compare]
390 | for(unsigned i=0; i<N; i++){
| ~^~
cluster.cc: At global scope:
cluster.cc:49:13: warning: ‘void prepare_neighbors(const char*, int, int)’ defined but not used [-Wunused-function]
49 | void static prepare_neighbors(const char* nbr_file, int skip, int p)
| ^~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c cstrsplit.cc -o cstrsplit.o
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/aux_/na_assert.hpp:23,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/arg.hpp:25,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/placeholders.hpp:24,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_categories.hpp:16,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:27,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: warning: unnecessary parentheses in declaration of ‘assert_arg’ [-Wparentheses]
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:194:21: note: remove parentheses
194 | failed ************ (Pred::************
| ^~~~~~~~~~~~~~~~~~~
| -
195 | assert_arg( void (*)(Pred), typename assert_arg_pred<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
196 | );
| ~
| -
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: warning: unnecessary parentheses in declaration of ‘assert_not_arg’ [-Wparentheses]
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mpl/assert.hpp:199:21: note: remove parentheses
199 | failed ************ (boost::mpl::not_<Pred>::************
| ^~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
| -
200 | assert_not_arg( void (*)(Pred), typename assert_arg_pred_not<Pred>::type )
| ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
201 | );
| ~
| -
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/bind/mem_fn.hpp:25,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/mem_fn.hpp:22,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/function/detail/prologue.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/function.hpp:30,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/detail/find_iterator.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:24,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:27,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:16,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:23,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/get_pointer.hpp:48:40: warning: ‘template<class> class std::auto_ptr’ is deprecated: use 'std::unique_ptr' instead [-Wdeprecated-declarations]
48 | template<class T> T * get_pointer(std::auto_ptr<T> const& p)
| ^~~~~~~~
In file included from /usr/include/c++/11/bits/locale_conv.h:41,
from /usr/include/c++/11/locale:43,
from /usr/include/c++/11/iomanip:43,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include/RcppCommon.h:53,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include/Rcpp.h:27,
from cstrsplit.cc:2:
/usr/include/c++/11/bits/unique_ptr.h:57:28: note: declared here
57 | template<typename> class auto_ptr;
| ^~~~~~~~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::constraint<Model>::failed() [with Model = boost::algorithm::FinderConcept<boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >, const char*>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:81:13: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:65:52: warning: ‘this’ pointer is null [-Wnonnull]
65 | static void failed() { ((Model*)0)->constraints(); }
| ~~~~~~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:26,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:16,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:23,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/concept.hpp:40:18: note: in a call to non-static member function ‘void boost::algorithm::FinderConcept<FinderT, IteratorT>::constraints() [with FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >; IteratorT = const char*]’
40 | void constraints()
| ^~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<const char*> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<const char*>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>)>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_concepts.hpp:114:7: required from ‘struct boost::range_detail::IncrementableIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<const char*> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<const char*>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<const char*> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<const char*>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>)>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:152:13: [ skipping 17 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:152:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<const char*>)>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<const char*> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::range_detail::SinglePassIteratorConcept<const char*>)>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: [ skipping 12 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:278:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >)>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = const char*]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: required from ‘struct boost::concepts::requirement_<void (*)(boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >)>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: [ skipping 7 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:5: note: in a call to non-static member function ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >]’
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ^
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/assert.hpp:35,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp: In instantiation of ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/algorithm/equal.hpp:174:13: required from ‘bool boost::range::equal(const SinglePassRange1&, const SinglePassRange2&) [with SinglePassRange1 = boost::iterator_range<const char*>; SinglePassRange2 = boost::iterator_range<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:644:32: required from ‘bool boost::operator==(const boost::iterator_range<IteratorT>&, const boost::iterator_range<Iterator2T>&) [with Iterator1T = const char*; Iterator2T = const char*]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/find_iterator.hpp:359:32: required from ‘bool boost::algorithm::split_iterator<IteratorT>::equal(const boost::algorithm::split_iterator<IteratorT>&) const [with IteratorT = const char*]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:649:26: required from ‘static bool boost::iterators::iterator_core_access::equal(const Facade1&, const Facade2&, mpl_::true_) [with Facade1 = boost::algorithm::split_iterator<const char*>; Facade2 = boost::algorithm::split_iterator<const char*>; mpl_::true_ = mpl_::bool_<true>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:981:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator==(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::algorithm::split_iterator<const char*>; V1 = const boost::iterator_range<const char*>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = const boost::iterator_range<const char*>&; Difference1 = long int; Derived2 = boost::algorithm::split_iterator<const char*>; V2 = const boost::iterator_range<const char*>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = const boost::iterator_range<const char*>&; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_adaptor.hpp:305:29: [ skipping 2 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: warning: ‘this’ pointer is null [-Wnonnull]
50 | static void failed() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
In file included from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:31,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size_type.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/size.hpp:21,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/functions.hpp:20,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range_core.hpp:38,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/iterator_range.hpp:13,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/as_literal.hpp:18,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/trim.hpp:19,
from /home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string.hpp:19,
from cstrsplit.cc:7:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<const char*>]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::CopyConstructible<const char*>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::CopyConstructible<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: required from ‘struct boost::CopyConstructible<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:125:16: required from ‘struct boost::range_detail::IncrementableIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: [ skipping 15 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::CopyConstructible<TT>::~CopyConstructible() [with TT = const char*]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:167:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
167 | BOOST_CONCEPT_USAGE(CopyConstructible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::incrementable_traversal_tag> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 19 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::incrementable_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::IncrementableIteratorConcept<const char*>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::IncrementableIteratorConcept<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: required from ‘struct boost::range_detail::IncrementableIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::IncrementableIteratorConcept<Iterator>::~IncrementableIteratorConcept() [with Iterator = const char*]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:136:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
136 | BOOST_CONCEPT_USAGE(IncrementableIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::EqualityComparable<const char*>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::EqualityComparable<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: required from ‘struct boost::EqualityComparable<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:147:16: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: [ skipping 14 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::EqualityComparable<TT>::~EqualityComparable() [with TT = const char*]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:233:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
233 | BOOST_CONCEPT_USAGE(EqualityComparable) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: required from ‘struct boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::Convertible<boost::iterators::random_access_traversal_tag, boost::iterators::single_pass_traversal_tag> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 18 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::Convertible<X, Y>::~Convertible() [with X = boost::iterators::random_access_traversal_tag; Y = boost::iterators::single_pass_traversal_tag]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept_check.hpp:208:5: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
208 | BOOST_CONCEPT_USAGE(Convertible) {
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::range_detail::SinglePassIteratorConcept<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: required from ‘struct boost::range_detail::SinglePassIteratorConcept<const char*>’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::range_detail::SinglePassIteratorConcept<const char*>]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::range_detail::SinglePassIteratorConcept<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 13 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::range_detail::SinglePassIteratorConcept<Iterator>::~SinglePassIteratorConcept() [with Iterator = const char*]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:158:13: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
158 | BOOST_CONCEPT_USAGE(SinglePassIteratorConcept)
| ^~~~~~~~~~~~~~~~~~~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp: In instantiation of ‘boost::concepts::usage_requirements<Model>::~usage_requirements() [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >]’:
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:50:47: required from ‘static void boost::concepts::requirement<boost::concepts::failed************ Model::************>::failed() [with Model = boost::concepts::usage_requirements<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: required from ‘struct boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:32:62: required by substitution of ‘template<class Model> boost::concepts::detail::yes boost::concepts::detail::has_constraints_(Model*, boost::concepts::detail::wrap_constraints<Model, (& Model::constraints)>*) [with Model = boost::SinglePassRangeConcept<const boost::iterator_range<const char*> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:42:5: required from ‘const bool boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >::value’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/has_constraints.hpp:45:51: required from ‘struct boost::concepts::not_satisfied<boost::SinglePassRangeConcept<const boost::iterator_range<const char*> > >’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/detail/general.hpp:72:8: [ skipping 8 instantiation contexts, use -ftemplate-backtrace-limit=0 to disable ]
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/iterator/iterator_facade.hpp:982:3: required from ‘typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type boost::iterators::operator!=(const boost::iterators::iterator_facade<Derived1, V1, TC1, Reference1, Difference1>&, const boost::iterators::iterator_facade<Derived2, V2, TC2, Reference2, Difference2>&) [with Derived1 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V1 = std::__cxx11::basic_string<char>; TC1 = boost::iterators::forward_traversal_tag; Reference1 = std::__cxx11::basic_string<char>; Difference1 = long int; Derived2 = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; V2 = std::__cxx11::basic_string<char>; TC2 = boost::iterators::forward_traversal_tag; Reference2 = std::__cxx11::basic_string<char>; Difference2 = long int; typename boost::iterators::detail::enable_if_interoperable<Derived1, Derived2, typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type>::type = bool; typename boost::mpl::apply2<boost::iterators::detail::always_bool2, Derived1, Derived2>::type = bool]’
/usr/include/c++/11/bits/stl_vector.h:1562:21: required from ‘void std::vector<_Tp, _Alloc>::_M_range_initialize(_InputIterator, _InputIterator, std::input_iterator_tag) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >]’
/usr/include/c++/11/bits/stl_vector.h:657:23: required from ‘std::vector<_Tp, _Alloc>::vector(_InputIterator, _InputIterator, const allocator_type&) [with _InputIterator = boost::iterators::transform_iterator<boost::algorithm::detail::copy_iterator_rangeF<std::__cxx11::basic_string<char>, const char*>, boost::algorithm::split_iterator<const char*>, boost::use_default, boost::use_default>; <template-parameter-2-2> = void; _Tp = std::__cxx11::basic_string<char>; _Alloc = std::allocator<std::__cxx11::basic_string<char> >; std::vector<_Tp, _Alloc>::allocator_type = std::allocator<std::__cxx11::basic_string<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/iter_find.hpp:186:31: required from ‘SequenceSequenceT& boost::algorithm::iter_split(SequenceSequenceT&, RangeT&&, FinderT) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; FinderT = boost::algorithm::detail::token_finderF<boost::algorithm::detail::is_any_ofF<char> >]’
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/algorithm/string/split.hpp:158:50: required from ‘SequenceSequenceT& boost::algorithm::split(SequenceSequenceT&, RangeT&&, PredicateT, boost::algorithm::token_compress_mode_type) [with SequenceSequenceT = std::vector<std::__cxx11::basic_string<char> >; RangeT = const char*&; PredicateT = boost::algorithm::detail::is_any_ofF<char>]’
cstrsplit.cc:14:15: required from here
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:20:48: warning: ‘this’ pointer is null [-Wnonnull]
20 | ~usage_requirements() { ((Model*)0)->~Model(); }
| ~~~~~~~~~~~~~~~~~~~^~
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/concept/usage.hpp:37:7: note: in a call to non-static member function ‘boost::SinglePassRangeConcept<T>::~SinglePassRangeConcept() [with T = const boost::iterator_range<const char*>]’
37 | ~model()
| ^
/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include/boost/range/concepts.hpp:284:9: note: in expansion of macro ‘BOOST_CONCEPT_USAGE’
284 | BOOST_CONCEPT_USAGE(SinglePassRangeConcept)
| ^~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c desc.cc -o desc.o
desc.cc: In function ‘SEXPREC* genAPDescriptor(SEXP)’:
desc.cc:249:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<unsigned int>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
249 | for(int i=0; i < descs.size(); i++)
| ~~^~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c fingerprints.cc -o fingerprints.o
fingerprints.cc: In function ‘SEXPREC* uniquifyAtomPairs(SEXP)’:
fingerprints.cc:138:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<IndexedValue*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
138 | for(int i=0; i < aps.size(); i++)
| ~~^~~~~~~~~~~~
fingerprints.cc:145:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<IndexedValue*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
145 | for(int i=0; i < aps.size(); i++){
| ~~^~~~~~~~~~~~
fingerprints.cc:158:24: warning: comparison of integer expressions of different signedness: ‘int’ and ‘std::vector<IndexedValue*>::size_type’ {aka ‘long unsigned int’} [-Wsign-compare]
158 | for(int i=0; i < aps.size(); i++){
| ~~^~~~~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c formats.cc -o formats.o
In file included from /usr/include/string.h:535,
from formats.cc:4:
In function ‘char* strncpy(char*, const char*, size_t)’,
inlined from ‘int sdf_iter(std::fstream&, std::string&, int&)’ at formats.cc:237:10:
/usr/include/x86_64-linux-gnu/bits/string_fortified.h:95:34: warning: ‘char* __builtin_strncpy(char*, const char*, long unsigned int)’ output may be truncated copying 4 bytes from a string of length 100001 [-Wstringop-truncation]
95 | return __builtin___strncpy_chk (__dest, __src, __len,
| ~~~~~~~~~~~~~~~~~~~~~~~~^~~~~~~~~~~~~~~~~~~~~~
96 | __glibc_objsize (__dest));
| ~~~~~~~~~~~~~~~~~~~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c molecule.cc -o molecule.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c r_wrap.cc -o r_wrap.o
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c script.cc -o script.o
In file included from script.cc:2:
desc.h:39:13: warning: ‘elements’ defined but not used [-Wunused-variable]
39 | static char elements[112][3] = {
| ^~~~~~~~
g++ -std=gnu++17 -I"/home/biocbuild/bbs-3.18-bioc/R/include" -DNDEBUG -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/Rcpp/include' -I'/home/biocbuild/bbs-3.18-bioc/R/site-library/BH/include' -I/usr/local/include -DNO_MAIN -DNO_DEBUG -fpic -g -O2 -Wall -c similarity.cc -o similarity.o
In file included from similarity.cc:1:
desc.h:39:13: warning: ‘elements’ defined but not used [-Wunused-variable]
39 | static char elements[112][3] = {
| ^~~~~~~~
g++ -std=gnu++17 -shared -L/home/biocbuild/bbs-3.18-bioc/R/lib -L/usr/local/lib -o ChemmineR.so DisjointSets.o cluster.o cstrsplit.o desc.o fingerprints.o formats.o molecule.o r_wrap.o script.o similarity.o -L/home/biocbuild/bbs-3.18-bioc/R/lib -lR
installing to /home/biocbuild/bbs-3.18-bioc/R/site-library/00LOCK-ChemmineR/00new/ChemmineR/libs
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ChemmineR)
ChemmineR.Rcheck/tests/runTests.Rout
R version 4.3.3 (2024-02-29) -- "Angel Food Cake"
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Platform: x86_64-pc-linux-gnu (64-bit)
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> BiocGenerics:::testPackage("ChemmineR")
======= testing fpset ===============================================
======= folding...
Loading required package: RSQLite
[1] "createing db"
[1] "createing db"
[1] "loading first half, no features"
[1] "createing db"
[1] "loading first half,with features"
adding new features to existing compounds. This could take a while
[1] "loading incomplete features"
[1] "loading second half"
adding new features to existing compounds. This could take a while
[1] "done loading"
[1] "createing db"
adding new features to existing compounds. This could take a while
[1] "found 70 compounds"
[1] "found 20 compounds"
Timing stopped at: 0 0 0
Error in DEACTIVATED("local test") : local test
In addition: There were 15 warnings (use warnings() to see them)
Timing stopped at: 0 0 0
Error in DEACTIVATED("local test only") : local test only
found 100 ids
[1] 201 202 203 204 205 206 207 208 209 210 211 212 213 214 215 216 217 218
[19] 219 220 221 222 223 224 225 226 227 228 229 230 231 232 233 234 235 236
[37] 237 238 239 240 241 242 243 244 245 246 247 248 249 250 251 252 253 254
[55] 255 256 257 258 259 260 261 262 263 264 265 266 267 268 269 270 271 272
[73] 273 274 275 276 277 278 279 280 281 282 283 284 285 286 287 288 289 290
[91] 291 292 293 294 295 296 297 298 299 300
starting parBatchByIndex
Loading required package: snow
int [1:100] 201 202 203 204 205 206 207 208 209 210 ...
NULL
[1] "results: parBench-sub-1,parBench-sub-2,parBench-sub-3,parBench-sub-4,parBench-sub-5,parBench-sub-6,parBench-sub-7,parBench-sub-8,parBench-sub-9,parBench-sub-10"
[1] "loading duplications"
loading 1 new compounds, updating 1 compounds
fetching features:
Timing stopped at: 0 0 0.001
Error in DEACTIVATED("causing timeout on bioc, disabling for now") :
causing timeout on bioc, disabling for now
In addition: Warning messages:
1: In for (Cl in classes) if (is(object, Cl)) return(object) :
closing unused connection 5 (<-localhost:11414)
2: In for (Cl in classes) if (is(object, Cl)) return(object) :
closing unused connection 4 (<-localhost:11414)
3: In for (Cl in classes) if (is(object, Cl)) return(object) :
closing unused connection 3 (<-localhost:11414)
Timing stopped at: 0 0 0
Error in DEACTIVATED("this test requires ChemmineOB, but not available") :
this test requires ChemmineOB, but not available
Timing stopped at: 0 0 0
Error in DEACTIVATED("this test requires ChemmineOB, but not available") :
this test requires ChemmineOB, but not available
Timing stopped at: 0 0 0.001
Error in DEACTIVATED("this test requires ChemmineOB, but not available") :
this test requires ChemmineOB, but not available
Timing stopped at: 0.001 0 0
Error in DEACTIVATED("this test requires ChemmineOB, but not available") :
this test requires ChemmineOB, but not available
Timing stopped at: 0 0 0
Error in DEACTIVATED("removed old version of function") :
removed old version of function
Timing stopped at: 0 0 0
Error in DEACTIVATED("just for manual testing") : just for manual testing
Timing stopped at: 0 0 0
Error in DEACTIVATED("this test requires ChemmineOB, but not available") :
this test requires ChemmineOB, but not available
Timing stopped at: 0 0 0
Error in DEACTIVATED("requires local files") : requires local files
Timing stopped at: 0 0 0
Error in DEACTIVATED("fails on ubuntu 16.04") : fails on ubuntu 16.04
Timing stopped at: 0 0 0
Error in DEACTIVATED("Causes SSL protocol version error on BioC") :
Causes SSL protocol version error on BioC
Timing stopped at: 0 0 0
Error in DEACTIVATED("this test requires ChemmineOB, but not available") :
this test requires ChemmineOB, but not available
Timing stopped at: 0 0 0.001
Error in DEACTIVATED("this test requires ChemmineOB, but not installed") :
this test requires ChemmineOB, but not installed
RUNIT TEST PROTOCOL -- Wed Apr 10 21:08:02 2024
***********************************************
Number of test functions: 16
Number of deactivated test functions: 15
Number of errors: 0
Number of failures: 0
1 Test Suite :
ChemmineR RUnit Tests - 16 test functions, 0 errors, 0 failures
Number of test functions: 16
Number of deactivated test functions: 15
Number of errors: 0
Number of failures: 0
>
> proc.time()
user system elapsed
9.029 0.278 10.076
ChemmineR.Rcheck/ChemmineR-Ex.timings
| name | user | system | elapsed | |
| AP-class | 0.296 | 0.040 | 0.336 | |
| APset-class | 0.332 | 0.024 | 0.356 | |
| ExtSDF-class | 0.001 | 0.000 | 0.001 | |
| FP-class | 0.068 | 0.002 | 0.070 | |
| FPset-class | 0.238 | 0.026 | 0.264 | |
| SDF-class | 0.039 | 0.003 | 0.043 | |
| SDF2apcmp | 0.021 | 0.001 | 0.021 | |
| SDFDataTable | 0.001 | 0.000 | 0.000 | |
| SDFset-class | 0.216 | 0.028 | 0.244 | |
| SDFset2SDF | 0.054 | 0.000 | 0.055 | |
| SDFset2list | 0.041 | 0.004 | 0.046 | |
| SDFstr-class | 0.217 | 0.000 | 0.218 | |
| SMI-class | 0.002 | 0.000 | 0.002 | |
| SMIset-class | 0.003 | 0.000 | 0.004 | |
| addDescriptorType | 0.001 | 0.000 | 0.000 | |
| addNewFeatures | 2.338 | 0.032 | 2.370 | |
| ap | 0.091 | 0.012 | 0.103 | |
| apfp | 0.003 | 0.000 | 0.003 | |
| apset | 0.005 | 0.000 | 0.005 | |
| apset2descdb | 0.255 | 0.040 | 0.294 | |
| atomblock | 0.057 | 0.011 | 0.069 | |
| atomcount | 0.139 | 0.000 | 0.139 | |
| atomprop | 0.003 | 0.000 | 0.002 | |
| atomsubset | 0.023 | 0.000 | 0.022 | |
| batchByIndex | 0 | 0 | 0 | |
| bondblock | 0.061 | 0.004 | 0.065 | |
| bonds | 0.022 | 0.004 | 0.026 | |
| browseJob | 0 | 0 | 0 | |
| bufferLines | 0 | 0 | 0 | |
| bufferResultSet | 0.000 | 0.000 | 0.001 | |
| byCluster | 0.604 | 0.067 | 0.670 | |
| canonicalNumbering | 0 | 0 | 0 | |
| canonicalize | 0 | 0 | 0 | |
| cid | 0.019 | 0.000 | 0.018 | |
| cluster.sizestat | 0.370 | 0.004 | 0.374 | |
| cluster.visualize | 0.498 | 0.031 | 0.530 | |
| cmp.cluster | 1.434 | 0.013 | 1.445 | |
| cmp.duplicated | 0.059 | 0.000 | 0.058 | |
| cmp.parse | 0.022 | 0.000 | 0.022 | |
| cmp.parse1 | 0 | 0 | 0 | |
| cmp.search | 0.613 | 0.020 | 0.632 | |
| cmp.similarity | 0.013 | 0.000 | 0.014 | |
| conMA | 0.041 | 0.000 | 0.041 | |
| connections | 0.164 | 0.000 | 0.165 | |
| datablock | 0.149 | 0.004 | 0.153 | |
| datablock2ma | 0.025 | 0.000 | 0.026 | |
| db.explain | 0.025 | 0.000 | 0.026 | |
| db.subset | 0.002 | 0.000 | 0.003 | |
| dbTransaction | 0.019 | 0.000 | 0.019 | |
| desc2fp | 0.082 | 0.000 | 0.082 | |
| draw_sdf | 0.434 | 0.032 | 0.445 | |
| exactMassOB | 0 | 0 | 0 | |
| findCompounds | 2.040 | 0.020 | 2.059 | |
| findCompoundsByName | 0.254 | 0.004 | 0.259 | |
| fingerprintOB | 0 | 0 | 0 | |
| fold | 0.001 | 0.000 | 0.001 | |
| foldCount | 0.000 | 0.000 | 0.001 | |
| fp2bit | 0.203 | 0.028 | 0.231 | |
| fpSim | 0.216 | 0.000 | 0.216 | |
| fptype | 0.001 | 0.000 | 0.000 | |
| fromNNMatrix | 0.558 | 0.008 | 0.565 | |
| genAPDescriptors | 0.015 | 0.000 | 0.014 | |
| genParameters | 0.264 | 0.032 | 0.295 | |
| generate3DCoords | 0 | 0 | 0 | |
| getAllCompoundIds | 0.272 | 0.000 | 0.273 | |
| getAtomAttr | 0 | 0 | 0 | |
| getBondAttr | 0 | 0 | 0 | |
| getCompoundFeatures | 2.052 | 0.000 | 2.053 | |
| getCompoundNames | 0.263 | 0.000 | 0.262 | |
| getCompounds | 0.271 | 0.000 | 0.272 | |
| getIds | 0 | 0 | 0 | |
| grepSDFset | 0.037 | 0.000 | 0.037 | |
| groups | 0.098 | 0.004 | 0.101 | |
| header | 0.063 | 0.000 | 0.063 | |
| initDb | 0.013 | 0.004 | 0.017 | |
| jarvisPatrick | 1.333 | 0.036 | 1.369 | |
| jobToken-class | 0 | 0 | 0 | |
| largestComponent | 0 | 0 | 0 | |
| launchCMTool | 0 | 0 | 0 | |
| listCMTools | 0 | 0 | 0 | |
| listFeatures | 0.277 | 0.003 | 0.280 | |
| loadSdf | 2.323 | 0.012 | 2.334 | |
| makeUnique | 0.011 | 0.004 | 0.015 | |
| maximallyDissimilar | 0.150 | 0.000 | 0.149 | |
| nearestNeighbors | 0.762 | 0.004 | 0.766 | |
| numBits | 0.000 | 0.000 | 0.001 | |
| obmol | 0.000 | 0.000 | 0.001 | |
| openBabelPlot | 0 | 0 | 0 | |
| parBatchByIndex | 0 | 0 | 0 | |
| plotStruc | 0.167 | 0.008 | 0.174 | |
| propOB | 0 | 0 | 0 | |
| pubchemCidToSDF | 0 | 0 | 0 | |
| pubchemFPencoding | 0.002 | 0.000 | 0.002 | |
| pubchemInchi2cid | 0 | 0 | 0 | |
| pubchemInchikey2sdf | 0 | 0 | 0 | |
| pubchemName2CID | 0 | 0 | 0 | |
| pubchemSDFSearch | 0 | 0 | 0 | |
| pubchemSmilesSearch | 0 | 0 | 0 | |
| read.AP | 0.010 | 0.004 | 0.014 | |
| read.SDFindex | 0.014 | 0.000 | 0.015 | |
| read.SDFset | 0.424 | 0.032 | 0.456 | |
| read.SDFstr | 0.636 | 0.000 | 0.637 | |
| read.SMIset | 0.002 | 0.000 | 0.001 | |
| regenerateCoords | 0 | 0 | 0 | |
| result | 0 | 0 | 0 | |
| rings | 0.486 | 0.008 | 0.495 | |
| sdf.subset | 0.000 | 0.000 | 0.001 | |
| sdf.visualize | 0.017 | 0.000 | 0.017 | |
| sdf2ap | 0.248 | 0.024 | 0.273 | |
| sdf2list | 0.018 | 0.004 | 0.021 | |
| sdf2smiles | 0 | 0 | 0 | |
| sdf2str | 0.022 | 0.000 | 0.023 | |
| sdfStream | 0.014 | 0.000 | 0.014 | |
| sdfid | 0.015 | 0.000 | 0.015 | |
| sdfsample | 0.023 | 0.004 | 0.026 | |
| sdfstr2list | 0.388 | 0.132 | 0.520 | |
| searchSim | 0 | 0 | 0 | |
| searchString | 0 | 0 | 0 | |
| selectInBatches | 0 | 0 | 0 | |
| setPriorities | 0 | 0 | 0 | |
| smartsSearchOB | 0 | 0 | 0 | |
| smiles2sdf | 0.000 | 0.001 | 0.001 | |
| smisample | 0.000 | 0.002 | 0.002 | |
| status | 0 | 0 | 0 | |
| toolDetails | 0 | 0 | 0 | |
| trimNeighbors | 1.047 | 0.011 | 1.058 | |
| validSDF | 0.017 | 0.000 | 0.016 | |
| view | 0.025 | 0.008 | 0.033 | |
| write.SDF | 0.107 | 0.000 | 0.107 | |
| write.SDFsplit | 0.006 | 0.008 | 0.015 | |
| write.SMI | 0.001 | 0.000 | 0.001 | |