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This page was generated on 2022-08-11 11:08:52 -0400 (Thu, 11 Aug 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4375
palomino4Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4159
lconwaymacOS 12.2.1 Montereyx86_644.2.1 Patched (2022-07-09 r82577) -- "Funny-Looking Kid" 4165
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for RnaSeqSampleSize on lconway


To the developers/maintainers of the RnaSeqSampleSize package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RnaSeqSampleSize.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1678/2139HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RnaSeqSampleSize 2.7.0  (landing page)
Shilin Zhao Developer
Snapshot Date: 2022-08-10 14:00:02 -0400 (Wed, 10 Aug 2022)
git_url: https://git.bioconductor.org/packages/RnaSeqSampleSize
git_branch: master
git_last_commit: 4fa3849
git_last_commit_date: 2022-04-26 12:09:26 -0400 (Tue, 26 Apr 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino4Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
lconwaymacOS 12.2.1 Monterey / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RnaSeqSampleSize
Version: 2.7.0
Command: rm -rf RnaSeqSampleSize.buildbin-libdir && mkdir RnaSeqSampleSize.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh RnaSeqSampleSize_2.7.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R RnaSeqSampleSize.buildbin-libdir
StartedAt: 2022-08-10 23:59:10 -0400 (Wed, 10 Aug 2022)
EndedAt: 2022-08-11 00:00:23 -0400 (Thu, 11 Aug 2022)
EllapsedTime: 72.6 seconds
RetCode: 0
Status:   OK  
PackageFile: RnaSeqSampleSize_2.7.0.tgz
PackageFileSize: 329.7 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf RnaSeqSampleSize.buildbin-libdir && mkdir RnaSeqSampleSize.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh RnaSeqSampleSize_2.7.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R RnaSeqSampleSize.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=RnaSeqSampleSize.buildbin-libdir RnaSeqSampleSize_2.7.0.tar.gz'
>>>>>>> 

* installing *source* package ‘RnaSeqSampleSize’ ...
** using staged installation
** libs
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c RcppExports.cpp -o RcppExports.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c RnaSeqSampleSize.c -o RnaSeqSampleSize.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c bd0.c -o bd0.o
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c cumsumBorder.cpp -o cumsumBorder.o
clang -mmacosx-version-min=10.13 -I"/Library/Frameworks/R.framework/Resources/include" -DNDEBUG  -I'/Library/Frameworks/R.framework/Versions/4.2/Resources/library/Rcpp/include' -I/usr/local/include   -fPIC  -Wall -g -O2  -c stirlerr.c -o stirlerr.o
clang++ -mmacosx-version-min=10.13 -std=gnu++14 -dynamiclib -Wl,-headerpad_max_install_names -undefined dynamic_lookup -single_module -multiply_defined suppress -L/Library/Frameworks/R.framework/Resources/lib -L/usr/local/lib -o RnaSeqSampleSize.so RcppExports.o RnaSeqSampleSize.o bd0.o cumsumBorder.o stirlerr.o -F/Library/Frameworks/R.framework/.. -framework R -Wl,-framework -Wl,CoreFoundation
installing to /Users/biocbuild/bbs-3.16-bioc/meat/RnaSeqSampleSize.buildbin-libdir/00LOCK-RnaSeqSampleSize/00new/RnaSeqSampleSize/libs
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** checking absolute paths in shared objects and dynamic libraries
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (RnaSeqSampleSize)


>>>>>>> 
>>>>>>> FIXING LINKS FOR RnaSeqSampleSize.buildbin-libdir/RnaSeqSampleSize/libs/RnaSeqSampleSize.so
>>>>>>> 

install_name_tool -change "/usr/local/lib/libgcc_s.1.dylib" "/Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libgcc_s.1.dylib" "RnaSeqSampleSize.buildbin-libdir/RnaSeqSampleSize/libs/RnaSeqSampleSize.so"
install_name_tool -change "/usr/local/lib/libgfortran.5.dylib" "/Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libgfortran.5.dylib" "RnaSeqSampleSize.buildbin-libdir/RnaSeqSampleSize/libs/RnaSeqSampleSize.so"
install_name_tool -change "/usr/local/lib/libquadmath.0.dylib" "/Library/Frameworks/R.framework/Versions/4.2/Resources/lib/libquadmath.0.dylib" "RnaSeqSampleSize.buildbin-libdir/RnaSeqSampleSize/libs/RnaSeqSampleSize.so"