Back to Build/check report for BioC 3.15 experimental data
ABCDEFGHIJKLMNO[P]QRSTUVWXYZ

This page was generated on 2022-06-30 14:50:09 -0400 (Thu, 30 Jun 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_644.2.0 (2022-04-22) -- "Vigorous Calisthenics" 4380
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

CHECK results for ProData on nebbiolo1


To the developers/maintainers of the ProData package:
Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 283/410HostnameOS / ArchINSTALLBUILDCHECK
ProData 1.34.0  (landing page)
Xiaochun Li
Snapshot Date: 2022-06-30 07:30:02 -0400 (Thu, 30 Jun 2022)
git_url: https://git.bioconductor.org/packages/ProData
git_branch: RELEASE_3_15
git_last_commit: a6298ab
git_last_commit_date: 2022-04-26 12:56:12 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: ProData
Version: 1.34.0
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --install=check:ProData.install-out.txt --library=/home/biocbuild/bbs-3.15-bioc/R/library --no-vignettes --timings ProData_1.34.0.tar.gz
StartedAt: 2022-06-30 11:36:46 -0400 (Thu, 30 Jun 2022)
EndedAt: 2022-06-30 11:36:58 -0400 (Thu, 30 Jun 2022)
EllapsedTime: 12.7 seconds
RetCode: 0
Status:   OK  
CheckDir: ProData.Rcheck
Warnings: 0

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD check --install=check:ProData.install-out.txt --library=/home/biocbuild/bbs-3.15-bioc/R/library --no-vignettes --timings ProData_1.34.0.tar.gz
###
##############################################################################
##############################################################################


* using log directory ‘/home/biocbuild/bbs-3.15-data-experiment/meat/ProData.Rcheck’
* using R version 4.2.0 (2022-04-22)
* using platform: x86_64-pc-linux-gnu (64-bit)
* using session charset: UTF-8
* using option ‘--no-vignettes’
* checking for file ‘ProData/DESCRIPTION’ ... OK
* this is package ‘ProData’ version ‘1.34.0’
* checking package namespace information ... OK
* checking package dependencies ... OK
* checking if this is a source package ... OK
* checking if there is a namespace ... OK
* checking for hidden files and directories ... OK
* checking for portable file names ... OK
* checking for sufficient/correct file permissions ... OK
* checking whether package ‘ProData’ can be installed ... OK
* checking installed package size ... NOTE
  installed size is 19.5Mb
  sub-directories of 1Mb or more:
    f45c  19.4Mb
* checking package directory ... OK
* checking DESCRIPTION meta-information ... OK
* checking top-level files ... OK
* checking for left-over files ... OK
* checking index information ... OK
* checking package subdirectories ... OK
* checking whether the package can be loaded ... OK
* checking whether the package can be loaded with stated dependencies ... OK
* checking whether the package can be unloaded cleanly ... OK
* checking whether the namespace can be loaded with stated dependencies ... OK
* checking whether the namespace can be unloaded cleanly ... OK
* checking Rd files ... OK
* checking Rd metadata ... OK
* checking Rd cross-references ... OK
* checking for missing documentation entries ... OK
* checking for code/documentation mismatches ... OK
* checking Rd \usage sections ... OK
* checking Rd contents ... OK
* checking for unstated dependencies in examples ... OK
* checking contents of ‘data’ directory ... OK
* checking data for non-ASCII characters ... OK
* checking data for ASCII and uncompressed saves ... OK
* checking examples ... OK
* checking PDF version of manual ... OK
* DONE

Status: 1 NOTE
See
  ‘/home/biocbuild/bbs-3.15-data-experiment/meat/ProData.Rcheck/00check.log’
for details.



Installation output

ProData.Rcheck/00install.out

##############################################################################
##############################################################################
###
### Running command:
###
###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD INSTALL ProData
###
##############################################################################
##############################################################################


* installing to library ‘/home/biocbuild/bbs-3.15-bioc/R/library’
* installing *source* package ‘ProData’ ...
** using staged installation
** data
** inst
** help
*** installing help indices
** building package indices
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* DONE (ProData)

Tests output


Example timings

ProData.Rcheck/ProData-Ex.timings

nameusersystemelapsed
ProData0.0920.0040.096
f45cbmk0.0010.0000.002