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This page was generated on 2022-10-19 13:20:59 -0400 (Wed, 19 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4138
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD results for timeOmics on nebbiolo1


To the developers/maintainers of the timeOmics package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/timeOmics.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 2009/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
timeOmics 1.8.0  (landing page)
Antoine Bodein
Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022)
git_url: https://git.bioconductor.org/packages/timeOmics
git_branch: RELEASE_3_15
git_last_commit: 8c79939
git_last_commit_date: 2022-04-26 12:04:14 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  OK    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  OK    ERROR  skippedskipped

Summary

Package: timeOmics
Version: 1.8.0
Command: /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data timeOmics
StartedAt: 2022-10-18 18:17:19 -0400 (Tue, 18 Oct 2022)
EndedAt: 2022-10-18 18:17:51 -0400 (Tue, 18 Oct 2022)
EllapsedTime: 32.1 seconds
RetCode: 1
Status:   ERROR  
PackageFile: None
PackageFileSize: NA

Command output

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### Running command:
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###   /home/biocbuild/bbs-3.15-bioc/R/bin/R CMD build --keep-empty-dirs --no-resave-data timeOmics
###
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* checking for file ‘timeOmics/DESCRIPTION’ ... OK
* preparing ‘timeOmics’:
* checking DESCRIPTION meta-information ... OK
* installing the package to build vignettes
* creating vignettes ... ERROR
--- re-building ‘vignette.Rmd’ using rmarkdown
Loading required package: mixOmics
Loading required package: MASS
Loading required package: lattice
Loading required package: ggplot2

Loaded mixOmics 6.20.0
Thank you for using mixOmics!
Tutorials: http://mixomics.org
Bookdown vignette: https://mixomicsteam.github.io/Bookdown
Questions, issues: Follow the prompts at http://mixomics.org/contact-us
Cite us:  citation('mixOmics')

── Attaching packages ─────────────────────────────────────── tidyverse 1.3.2 ──
✔ tibble  3.1.8      ✔ dplyr   1.0.10
✔ tidyr   1.2.1      ✔ stringr 1.4.1 
✔ readr   2.1.3      ✔ forcats 0.5.2 
✔ purrr   0.3.5      
── Conflicts ────────────────────────────────────────── tidyverse_conflicts() ──
✖ dplyr::filter() masks stats::filter()
✖ dplyr::lag()    masks stats::lag()
✖ purrr::map()    masks mixOmics::map()
✖ dplyr::select() masks MASS::select()
Warning: Removed 3 row(s) containing missing values (geom_path).
Warning: Removed 3 rows containing missing values (geom_point).
Quitting from lines 532-541 (vignette.Rmd) 
Error: processing vignette 'vignette.Rmd' failed with diagnostics:
length(class2) == 1L is not TRUE
--- failed re-building ‘vignette.Rmd’

SUMMARY: processing the following file failed:
  ‘vignette.Rmd’

Error: Vignette re-building failed.
Execution halted