Back to Multiple platform build/check report for BioC 3.15
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This page was generated on 2022-03-18 11:08:36 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for scAlign on riesling1


To the developers/maintainers of the scAlign package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/scAlign.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1710/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
scAlign 1.9.0  (landing page)
Nelson Johansen
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/scAlign
git_branch: master
git_last_commit: e55d97f
git_last_commit_date: 2021-12-16 16:07:24 -0400 (Thu, 16 Dec 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    ERROR  
riesling1Windows Server 2019 Standard / x64  OK    OK    ERROR    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    ERROR    OK  
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: scAlign
Version: 1.9.0
Command: rm -rf scAlign.buildbin-libdir && mkdir scAlign.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=scAlign.buildbin-libdir scAlign_1.9.0.tar.gz
StartedAt: 2022-03-17 21:37:00 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:38:35 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 94.6 seconds
RetCode: 0
Status:   OK  
PackageFile: scAlign_1.9.0.zip
PackageFileSize: 1.049 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf scAlign.buildbin-libdir && mkdir scAlign.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=scAlign.buildbin-libdir scAlign_1.9.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'scAlign' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'scAlign'
    finding HTML links ... done
    GetCrit                                 html  
    PlotTSNE                                html  
    RunMultiCCA                             html  
    UpdateW                                 html  
    alignment_score                         html  
    cellbench                               html  
    compute_kernel_matrix                   html  
    decoderModel_add_mse_loss               html  
    decoderModel_calc_projection            html  
    decoderModel_create_train_op            html  
    decoderModel_emb_to_proj                html  
    decoderModel_train_decoder              html  
    decoder_large                           html  
    decoder_medium                          html  
    decoder_small                           html  
    define_kernel_matrix                    html  
    dot-check_all_args                      html  
    dot-check_tensorflow                    html  
    dot-data_setup                          html  
    dot-early_stop                          html  
    dot-is.wholenumber                      html  
    dot-learning_rate                       html  
    dot-plotTSNE                            html  
    encoderModel_add_logit_loss             html  
    encoderModel_add_semisup_loss_data_driven
                                            html  
    encoderModel_calc_embedding             html  
    encoderModel_calc_logit                 html  
    encoderModel_create_train_op            html  
    encoderModel_data_to_embedding          html  
    encoderModel_embedding_to_logit         html  
    encoderModel_gaussian_kernel            html  
    encoderModel_train_encoder              html  
    encoderModel_train_encoder_multi        html  
    encoder_large                           html  
    encoder_medium                          html  
    encoder_small                           html  
    gaussianKernel                          html  
    l2n                                     html  
    scAlign                                 html  
    scAlignArguments                        html  
    scAlignCreateObject                     html  
    scAlignMulti                            html  
    scAlignOptions                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'scAlign' as scAlign_1.9.0.zip
* DONE (scAlign)