Multiple platform build/check report for BioC 3.15 - BUILD results for Rhtslib on palomino3

Back to Multiple platform build/check report for BioC 3.15

[R]

This page was generated on 2022-10-19 13:22:09 -0400 (Wed, 19 Oct 2022).

Hostname	OS	Arch (*)	R version	Installed pkgs
nebbiolo1	Linux (Ubuntu 20.04.5 LTS)	x86_64	4.2.1 (2022-06-23) -- "Funny-Looking Kid"	4386
palomino3	Windows Server 2022 Datacenter	x64	4.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid"	4138
merida1	macOS 10.14.6 Mojave	x86_64	4.2.1 (2022-06-23) -- "Funny-Looking Kid"	4205
Click on any hostname to see more info about the system (e.g. compilers) () as reported by 'uname -p', except on Windows and Mac OS X*

BUILD results for Rhtslib on palomino3

To the developers/maintainers of the Rhtslib package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rhtslib.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Rhtslib 1.28.0 (landing page)
Bioconductor Package Maintainer

Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022)

git_url: https://git.bioconductor.org/packages/Rhtslib

git_branch: RELEASE_3_15

git_last_commit: 214fde2

git_last_commit_date: 2022-04-26 11:23:58 -0400 (Tue, 26 Apr 2022)

nebbiolo1

Linux (Ubuntu 20.04.5 LTS) / x86_64

WARNINGS

palomino3

Windows Server 2022 Datacenter / x64

WARNINGS

merida1

macOS 10.14.6 Mojave / x86_64

Summary

Package: Rhtslib

Version: 1.28.0

Command: set _R_INSTALL_TIME_PATCHES_=no&& chmod a+r Rhtslib -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rhtslib

StartedAt: 2022-10-18 20:39:14 -0400 (Tue, 18 Oct 2022)

EndedAt: 2022-10-18 20:40:17 -0400 (Tue, 18 Oct 2022)

EllapsedTime: 62.7 seconds

RetCode: 0

Status: OK

PackageFile: Rhtslib_1.28.0.tar.gz

PackageFileSize: 1.402 MiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   set _R_INSTALL_TIME_PATCHES_=no&& chmod a+r Rhtslib -R && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD build --keep-empty-dirs --no-resave-data Rhtslib
###
##############################################################################
##############################################################################


* checking for file 'Rhtslib/DESCRIPTION' ... OK
* preparing 'Rhtslib':
* checking DESCRIPTION meta-information ... OK
* cleaning src
* installing the package to build vignettes
* creating vignettes ... OK
* cleaning src
* checking for LF line-endings in source and make files and shell scripts
* checking for empty or unneeded directories
* building 'Rhtslib_1.28.0.tar.gz'
Warning: file 'Rhtslib/src/htslib-1.7/configure' did not have execute permissions: corrected