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This page was generated on 2022-10-19 13:22:08 -0400 (Wed, 19 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4138
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for Rgin on palomino3


To the developers/maintainers of the Rgin package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Rgin.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1634/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Rgin 1.16.0  (landing page)
Hector Climente-Gonzalez
Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022)
git_url: https://git.bioconductor.org/packages/Rgin
git_branch: RELEASE_3_15
git_last_commit: a7fe493
git_last_commit_date: 2022-04-26 11:47:29 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  ERROR    ERROR  skipped
palomino3Windows Server 2022 Datacenter / x64  ERROR    ERROR  skippedskipped
merida1macOS 10.14.6 Mojave / x86_64  ERROR    ERROR  skippedskipped

Summary

Package: Rgin
Version: 1.16.0
Command: F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL Rgin
StartedAt: 2022-10-18 15:45:56 -0400 (Tue, 18 Oct 2022)
EndedAt: 2022-10-18 15:46:17 -0400 (Tue, 18 Oct 2022)
EllapsedTime: 21.0 seconds
RetCode: 1
Status:   ERROR  

Command output

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### Running command:
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###   F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL Rgin
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* installing to library 'F:/biocbuild/bbs-3.15-bioc/R/library'
* installing *source* package 'Rgin' ...
** using staged installation
** libs
gcc  -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.15-bioc/R/library/RcppEigen/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"   -D_LARGEFILE64_SOURCE   -O2 -Wall  -std=gnu99 -mfpmath=sse -msse2 -mstackrealign  -c Rgin-init.c -o Rgin-init.o
g++ -std=gnu++11  -I"F:/biocbuild/bbs-3.15-bioc/R/include" -DNDEBUG  -I'F:/biocbuild/bbs-3.15-bioc/R/library/RcppEigen/include'   -I"C:/rtools42/x86_64-w64-mingw32.static.posix/include"  -std=c++11 -fopenmp -D_USE_KNETFILE -D_FILE_OFFSET_BITS=64 -U_FORTIFY_SOURCE -DBGZF_CACHE -DAS_GINLIB -DAS_RGINLIB -I./include -I./lib `F:/biocbuild/bbs-3.15-bioc/R/bin/Rscript -e "Rcpp:::CxxFlags()"`   -O2 -Wall  -mfpmath=sse -msse2 -mstackrealign  -c src/feature_selection/feature_selector.cc -o src/feature_selection/feature_selector.o
In file included from ./include/gin/feature_selection/scones.h:8,
                 from src/feature_selection/feature_selector.cc:9:
./include/gin/globals.h:60:10: fatal error: Rcpp.h: No such file or directory
   60 | #include "Rcpp.h"
      |          ^~~~~~~~
compilation terminated.
make: *** [Makevars.win:16: src/feature_selection/feature_selector.o] Error 1
ERROR: compilation failed for package 'Rgin'
* removing 'F:/biocbuild/bbs-3.15-bioc/R/library/Rgin'