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This page was generated on 2022-03-18 11:08:33 -0400 (Fri, 18 Mar 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.4 LTS)x86_64R Under development (unstable) (2022-02-17 r81757) -- "Unsuffered Consequences" 4334
riesling1Windows Server 2019 Standardx64R Under development (unstable) (2021-11-21 r81221) -- "Unsuffered Consequences" 4097
palomino3Windows Server 2022 Datacenterx64R Under development (unstable) (2022-02-17 r81757 ucrt) -- "Unsuffered Consequences" 4083
merida1macOS 10.14.6 Mojavex86_64R Under development (unstable) (2022-03-02 r81842) -- "Unsuffered Consequences" 4134
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for RTCGA on riesling1


To the developers/maintainers of the RTCGA package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/RTCGA.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1676/2090HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
RTCGA 1.25.0  (landing page)
Marcin Kosinski
Snapshot Date: 2022-03-17 13:55:23 -0400 (Thu, 17 Mar 2022)
git_url: https://git.bioconductor.org/packages/RTCGA
git_branch: master
git_last_commit: 9c1828a
git_last_commit_date: 2021-10-26 12:22:32 -0400 (Tue, 26 Oct 2021)
nebbiolo1Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
riesling1Windows Server 2019 Standard / x64  OK    OK    OK    OK  
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: RTCGA
Version: 1.25.0
Command: rm -rf RTCGA.buildbin-libdir && mkdir RTCGA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=RTCGA.buildbin-libdir RTCGA_1.25.0.tar.gz
StartedAt: 2022-03-17 21:35:59 -0400 (Thu, 17 Mar 2022)
EndedAt: 2022-03-17 21:37:44 -0400 (Thu, 17 Mar 2022)
EllapsedTime: 105.7 seconds
RetCode: 0
Status:   OK  
PackageFile: RTCGA_1.25.0.zip
PackageFileSize: 521.4 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf RTCGA.buildbin-libdir && mkdir RTCGA.buildbin-libdir && D:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=RTCGA.buildbin-libdir RTCGA_1.25.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'RTCGA' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'RTCGA'
    finding HTML links ... done
    RTCGA-package                           html  
    boxplotTCGA                             html  
    finding level-2 HTML links ... done

    checkTCGA                               html  
    convertTCGA                             html  
    datasetsTCGA                            html  
    downloadTCGA                            html  
    expressionsTCGA                         html  
    heatmapTCGA                             html  
    infoTCGA                                html  
    installTCGA                             html  
    kmTCGA                                  html  
    mutationsTCGA                           html  
    pcaTCGA                                 html  
    readTCGA                                html  
    survivalTCGA                            html  
    theme_RTCGA                             html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'RTCGA' as RTCGA_1.25.0.zip
* DONE (RTCGA)