Back to Multiple platform build/check report for BioC 3.15
ABCDEFGHIJKL[M]NOPQRSTUVWXYZ

This page was generated on 2022-10-19 13:21:44 -0400 (Wed, 19 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4138
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for Maaslin2 on palomino3


To the developers/maintainers of the Maaslin2 package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/Maaslin2.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1052/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
Maaslin2 1.10.0  (landing page)
Lauren McIver
Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022)
git_url: https://git.bioconductor.org/packages/Maaslin2
git_branch: RELEASE_3_15
git_last_commit: 540229e
git_last_commit_date: 2022-04-26 11:57:43 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: Maaslin2
Version: 1.10.0
Command: rm -rf Maaslin2.buildbin-libdir && mkdir Maaslin2.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Maaslin2.buildbin-libdir Maaslin2_1.10.0.tar.gz
StartedAt: 2022-10-19 06:05:57 -0400 (Wed, 19 Oct 2022)
EndedAt: 2022-10-19 06:06:29 -0400 (Wed, 19 Oct 2022)
EllapsedTime: 31.8 seconds
RetCode: 0
Status:   OK  
PackageFile: Maaslin2_1.10.0.zip
PackageFileSize: 618.8 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf Maaslin2.buildbin-libdir && mkdir Maaslin2.buildbin-libdir && F:\biocbuild\bbs-3.15-bioc\R\bin\R.exe CMD INSTALL --build --library=Maaslin2.buildbin-libdir Maaslin2_1.10.0.tar.gz
###
##############################################################################
##############################################################################


* installing *source* package 'Maaslin2' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
Warning in checkMatrixPackageVersion() :
  Package version inconsistency detected.
TMB was built with Matrix version 1.4.1
Current Matrix version is 1.5.1
Please re-install 'TMB' from source using install.packages('TMB', type = 'source') or ask CRAN for a binary version of 'TMB' matching CRAN's 'Matrix' package
Warning in checkDepPackageVersion(dep_pkg = "TMB") :
  Package version inconsistency detected.
glmmTMB was built with TMB version 1.9.0
Current TMB version is 1.9.1
Please re-install glmmTMB from source or restore original 'TMB' package (see '?reinstalling' for more information)
** help
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path
* MD5 sums
packaged installation of 'Maaslin2' as Maaslin2_1.10.0.zip
* DONE (Maaslin2)