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This page was generated on 2022-10-19 13:23:08 -0400 (Wed, 19 Oct 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo1Linux (Ubuntu 20.04.5 LTS)x86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4386
palomino3Windows Server 2022 Datacenterx644.2.1 (2022-06-23 ucrt) -- "Funny-Looking Kid" 4138
merida1macOS 10.14.6 Mojavex86_644.2.1 (2022-06-23) -- "Funny-Looking Kid" 4205
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for InterMineR on merida1


To the developers/maintainers of the InterMineR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/InterMineR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 971/2140HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
InterMineR 1.18.0  (landing page)
InterMine Team
Snapshot Date: 2022-10-18 13:55:19 -0400 (Tue, 18 Oct 2022)
git_url: https://git.bioconductor.org/packages/InterMineR
git_branch: RELEASE_3_15
git_last_commit: 760e538
git_last_commit_date: 2022-04-26 11:43:08 -0400 (Tue, 26 Apr 2022)
nebbiolo1Linux (Ubuntu 20.04.5 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
palomino3Windows Server 2022 Datacenter / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
merida1macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: InterMineR
Version: 1.18.0
Command: rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.18.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R InterMineR.buildbin-libdir
StartedAt: 2022-10-19 10:33:12 -0400 (Wed, 19 Oct 2022)
EndedAt: 2022-10-19 10:34:04 -0400 (Wed, 19 Oct 2022)
EllapsedTime: 51.7 seconds
RetCode: 0
Status:   OK  
PackageFile: InterMineR_1.18.0.tgz
PackageFileSize: 746.3 KiB

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   rm -rf InterMineR.buildbin-libdir && mkdir InterMineR.buildbin-libdir && /Users/biocbuild/BBS/utils/build-universal.sh InterMineR_1.18.0.tar.gz /Library/Frameworks/R.framework/Resources/bin/R InterMineR.buildbin-libdir
###
##############################################################################
##############################################################################


>>>>>>> 
>>>>>>> INSTALLATION WITH 'R CMD INSTALL --preclean --no-multiarch --library=InterMineR.buildbin-libdir InterMineR_1.18.0.tar.gz'
>>>>>>> 

* installing *source* package ‘InterMineR’ ...
** using staged installation
** R
** data
*** moving datasets to lazyload DB
** inst
** byte-compile and prepare package for lazy loading
Creating a new generic function for ‘intersect’ in package ‘InterMineR’
Creating a new generic function for ‘union’ in package ‘InterMineR’
Creating a new generic function for ‘subtract’ in package ‘InterMineR’
** help
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:41: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:42: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:50: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:51: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:59: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:60: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:63: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:66: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:69: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:72: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:80: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:81: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:84: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:87: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:90: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:98: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:99: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:102: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:105: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:108: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:116: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:117: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:120: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:123: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:126: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:134: unexpected section header '\arguments'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:135: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:138: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:141: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:144: unknown macro '\item'
Warning: /private/tmp/RtmpF0DYbU/R.INSTALLda201a42cdc7/InterMineR/man/ListManager-methods.Rd:147: unknown macro '\item'
*** installing help indices
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘subtract’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package can be loaded from final location
Warning: multiple methods tables found for ‘union’
Warning: multiple methods tables found for ‘subtract’
Warning: multiple methods tables found for ‘intersect’
** testing if installed package keeps a record of temporary installation path
* DONE (InterMineR)