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This page was generated on 2022-01-26 13:07:01 -0500 (Wed, 26 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4329
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4080
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4141
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for nucleR on tokay2


To the developers/maintainers of the nucleR package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/nucleR.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1308/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
nucleR 2.26.0  (landing page)
Alba Sala
Snapshot Date: 2022-01-25 01:55:07 -0500 (Tue, 25 Jan 2022)
git_url: https://git.bioconductor.org/packages/nucleR
git_branch: RELEASE_3_14
git_last_commit: 25bc1aa
git_last_commit_date: 2021-10-26 11:59:45 -0500 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    WARNINGS  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    WARNINGS    OK  UNNEEDED, same version is already published

Summary

Package: nucleR
Version: 2.26.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/nucleR_2.26.0.tar.gz && rm -rf nucleR.buildbin-libdir && mkdir nucleR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nucleR.buildbin-libdir nucleR_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL nucleR_2.26.0.zip && rm nucleR_2.26.0.tar.gz nucleR_2.26.0.zip
StartedAt: 2022-01-25 05:32:29 -0500 (Tue, 25 Jan 2022)
EndedAt: 2022-01-25 05:34:05 -0500 (Tue, 25 Jan 2022)
EllapsedTime: 95.7 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
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###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/nucleR_2.26.0.tar.gz && rm -rf nucleR.buildbin-libdir && mkdir nucleR.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=nucleR.buildbin-libdir nucleR_2.26.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL nucleR_2.26.0.zip && rm nucleR_2.26.0.tar.gz nucleR_2.26.0.zip
###
##############################################################################
##############################################################################


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  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  1  805k    1 13289    0     0   101k      0  0:00:07 --:--:--  0:00:07  101k
100  805k  100  805k    0     0  1636k      0 --:--:-- --:--:-- --:--:-- 1638k

install for i386

* installing *source* package 'nucleR' ...
** using staged installation
** R
** data
** inst
** byte-compile and prepare package for lazy loading
Loading required package: usethis

Welcome at Tue Jan 25 05:32:51 2022 

Goodbye at  Tue Jan 25 05:33:02 2022 
** help
*** installing help indices
  converting help for package 'nucleR'
    finding HTML links ... done
    controlCorrection                       html  
    coverage.rpm                            html  
    dot-fftRegion                           html  
    dot-getThreshold                        html  
    dot-loadFiles                           html  
    dot-loadPairedBam                       html  
    dot-loadSingleBam                       html  
    dot-mid                                 html  
    dot-processStrand                       html  
    dot-unlist_as_integer                   html  
    dot-vectorizedAll                       html  
    dot-xlapply                             html  
    export.bed                              html  
    export.wig                              html  
    filterFFT                               html  
    fragmentLenDetect                       html  
    mergeCalls                              html  
    nucleR-package                          html  
    nucleosome_htseq                        html  
    nucleosome_tiling                       html  
    pcKeepCompDetect                        html  
    peakDetection                           html  
    peakScoring                             html  
    plotPeaks                               html  
    processReads                            html  
    processTilingArray                      html  
    readBAM                                 html  
    readBowtie                              html  
    syntheticNucMap                         html  
** building package indices
Loading required package: usethis

Welcome at Tue Jan 25 05:33:07 2022 

Goodbye at  Tue Jan 25 05:33:07 2022 
** installing vignettes
** testing if installed package can be loaded from temporary location
Loading required package: usethis

Welcome at Tue Jan 25 05:33:09 2022 

Goodbye at  Tue Jan 25 05:33:17 2022 
** testing if installed package can be loaded from final location
Loading required package: usethis

Welcome at Tue Jan 25 05:33:20 2022 

Goodbye at  Tue Jan 25 05:33:29 2022 
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'nucleR' ...
** testing if installed package can be loaded
Loading required package: usethis

Welcome at Tue Jan 25 05:33:33 2022 

Goodbye at  Tue Jan 25 05:33:43 2022 
* MD5 sums
packaged installation of 'nucleR' as nucleR_2.26.0.zip
* DONE (nucleR)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'nucleR' successfully unpacked and MD5 sums checked