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This page was generated on 2022-04-13 12:06:56 -0400 (Wed, 13 Apr 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.3 (2022-03-10) -- "One Push-Up" 4324
tokay2Windows Server 2012 R2 Standardx644.1.3 (2022-03-10) -- "One Push-Up" 4077
machv2macOS 10.14.6 Mojavex86_644.1.3 (2022-03-10) -- "One Push-Up" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

INSTALL results for motifStack on tokay2


To the developers/maintainers of the motifStack package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/motifStack.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 1204/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
motifStack 1.38.0  (landing page)
Jianhong Ou
Snapshot Date: 2022-04-12 01:55:07 -0400 (Tue, 12 Apr 2022)
git_url: https://git.bioconductor.org/packages/motifStack
git_branch: RELEASE_3_14
git_last_commit: 0c4bc16
git_last_commit_date: 2021-10-26 12:04:40 -0400 (Tue, 26 Oct 2021)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  UNNEEDED, same version is already published
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    OK    OK  UNNEEDED, same version is already published
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    OK    OK  UNNEEDED, same version is already published

Summary

Package: motifStack
Version: 1.38.0
Command: C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/motifStack_1.38.0.tar.gz && rm -rf motifStack.buildbin-libdir && mkdir motifStack.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=motifStack.buildbin-libdir motifStack_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL motifStack_1.38.0.zip && rm motifStack_1.38.0.tar.gz motifStack_1.38.0.zip
StartedAt: 2022-04-12 04:55:04 -0400 (Tue, 12 Apr 2022)
EndedAt: 2022-04-12 04:58:52 -0400 (Tue, 12 Apr 2022)
EllapsedTime: 227.6 seconds
RetCode: 0
Status:   OK  

Command output

##############################################################################
##############################################################################
###
### Running command:
###
###   C:\cygwin\bin\curl.exe -O http://155.52.207.166/BBS/3.14/bioc/src/contrib/motifStack_1.38.0.tar.gz && rm -rf motifStack.buildbin-libdir && mkdir motifStack.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=motifStack.buildbin-libdir motifStack_1.38.0.tar.gz && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL motifStack_1.38.0.zip && rm motifStack_1.38.0.tar.gz motifStack_1.38.0.zip
###
##############################################################################
##############################################################################


  % Total    % Received % Xferd  Average Speed   Time    Time     Time  Current
                                 Dload  Upload   Total   Spent    Left  Speed

  0     0    0     0    0     0      0      0 --:--:-- --:--:-- --:--:--     0
  2  217k    2  5211    0     0  62918      0  0:00:03 --:--:--  0:00:03 62783
100  217k  100  217k    0     0   281k      0 --:--:-- --:--:-- --:--:--  281k

install for i386

* installing *source* package 'motifStack' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'motifStack'
    finding HTML links ... done
    AAmotifAlignment                        html  
    DNAmotifAlignment                       html  
    DNAmotifToRNAmotif                      html  
    GeomMotif                               html  
    browseMotifs-shiny                      html  
    browseMotifs                            html  
    calF                                    html  
    calI                                    html  
    clusterMotifs                           html  
    colorset                                html  
    compare2profiles                        html  
    compareProfiles                         html  
    dpGlobal                                html  
    dpLocal                                 html  
    geom_motif                              html  
    getALLRscoreFromCounts                  html  
    getDistance                             html  
    getRankedUniqueMotifs                   html  
    getScore                                html  
    highlightCol                            html  
    importMatrix                            html  
    marker-class                            html  
    matalign                                html  
    mergeMotifs                             html  
    motifCircos                             html  
    motifCloud                              html  
    motifGrob                               html  
    motifHclust                             html  
    motifPiles                              html  
    motifSig-class                          html  
    motifSignature                          html  
    motifStack-package                      html  
    motifStack                              html  
    ouNode-class                            html  
    pcm-class                               html  
    pfm-class                               html  
    pfm2pwm                                 html  
    plotAffinityLogo                        html  
    plotMotifLogo                           html  
    plotMotifLogoA                          html  
    plotMotifLogoStack                      html  
    plotMotifLogoStackWithTree              html  
    plotMotifOverMotif                      html  
    plotMotifStackWithPhylog                html  
    plotMotifStackWithRadialPhylog          html  
    plotXaxis                               html  
    plotYaxis                               html  
    psam-class                              html  
    pssm-class                              html  
    readPCM                                 html  
    reorderUPGMAtree                        html  
    traceBackGlobal                         html  
    traceBackLocal                          html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'motifStack' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'motifStack' as motifStack_1.38.0.zip
* DONE (motifStack)
* installing to library 'C:/Users/biocbuild/bbs-3.14-bioc/R/library'
package 'motifStack' successfully unpacked and MD5 sums checked