Back to Multiple platform build/check report for BioC 3.14
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This page was generated on 2022-01-14 13:06:04 -0500 (Fri, 14 Jan 2022).

HostnameOSArch (*)R versionInstalled pkgs
nebbiolo2Linux (Ubuntu 20.04.4 LTS)x86_644.1.2 (2021-11-01) -- "Bird Hippie" 4327
tokay2Windows Server 2012 R2 Standardx644.1.2 (2021-11-01) -- "Bird Hippie" 4076
machv2macOS 10.14.6 Mojavex86_644.1.2 (2021-11-01) -- "Bird Hippie" 4137
Click on any hostname to see more info about the system (e.g. compilers)      (*) as reported by 'uname -p', except on Windows and Mac OS X

BUILD BIN results for biomaRt on tokay2


To the developers/maintainers of the biomaRt package:
- Please allow up to 24 hours (and sometimes 48 hours) for your latest push to git@git.bioconductor.org:packages/biomaRt.git to
reflect on this report. See How and When does the builder pull? When will my changes propagate? here for more information.
- Make sure to use the following settings in order to reproduce any error or warning you see on this page.

raw results

Package 182/2083HostnameOS / ArchINSTALLBUILDCHECKBUILD BIN
biomaRt 2.50.2  (landing page)
Mike Smith
Snapshot Date: 2022-01-13 01:55:04 -0500 (Thu, 13 Jan 2022)
git_url: https://git.bioconductor.org/packages/biomaRt
git_branch: RELEASE_3_14
git_last_commit: 9633bbd
git_last_commit_date: 2022-01-12 04:46:27 -0500 (Wed, 12 Jan 2022)
nebbiolo2Linux (Ubuntu 20.04.4 LTS) / x86_64  OK    OK    OK  YES
tokay2Windows Server 2012 R2 Standard / x64  OK    OK    ERROR    OK  
machv2macOS 10.14.6 Mojave / x86_64  OK    OK    ERROR    OK  

Summary

Package: biomaRt
Version: 2.50.2
Command: rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.50.2.tar.gz
StartedAt: 2022-01-14 05:06:30 -0500 (Fri, 14 Jan 2022)
EndedAt: 2022-01-14 05:07:07 -0500 (Fri, 14 Jan 2022)
EllapsedTime: 36.6 seconds
RetCode: 0
Status:   OK  
PackageFile: biomaRt_2.50.2.zip
PackageFileSize: 957 KiB

Command output

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###
### Running command:
###
###   rm -rf biomaRt.buildbin-libdir && mkdir biomaRt.buildbin-libdir && C:\Users\biocbuild\bbs-3.14-bioc\R\bin\R.exe CMD INSTALL --merge-multiarch --build --library=biomaRt.buildbin-libdir biomaRt_2.50.2.tar.gz
###
##############################################################################
##############################################################################



install for i386

* installing *source* package 'biomaRt' ...
** using staged installation
** R
** inst
** byte-compile and prepare package for lazy loading
** help
*** installing help indices
  converting help for package 'biomaRt'
    finding HTML links ... done
    Mart-class                              html  
    NP2009code                              html  
    attributePages                          html  
    biomaRt-deprecated                      html  
    biomartCache                            html  
    exportFASTA                             html  
    filterType                              html  
    getBM                                   html  
    getGene                                 html  
    getLDS                                  html  
    getSequence                             html  
    listAttributes                          html  
    listDatasets                            html  
    listEnsembl                             html  
    listEnsemblArchives                     html  
    listFilterValues                        html  
    listFilters                             html  
    listMarts                               html  
    select                                  html  
    useDataset                              html  
    useEnsembl                              html  
    useMart                                 html  
** building package indices
** installing vignettes
** testing if installed package can be loaded from temporary location
** testing if installed package can be loaded from final location
** testing if installed package keeps a record of temporary installation path

install for x64

* installing *source* package 'biomaRt' ...
** testing if installed package can be loaded
* MD5 sums
packaged installation of 'biomaRt' as biomaRt_2.50.2.zip
* DONE (biomaRt)